Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0080 ATGTCGGACGCTTTGATCAATGGCCTCGCTGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATATCCTCTCCAAACTGTAAACACTCGTCAACAGACCGAGCATGATCCGAAGAAAGACCGGAGGAATCTTGGAACTCTTGAGCAAATGCGCCAGGTTGTAAAGCACGAAGGGTGGGATCGGTTGTACGGAGGATTGATGCCGTCGCTTGTGGGCACTGCTGCGTCTCAGGGTGTTTACTACTACTTCTATCAAGTATTTAGGAGCAAGGCTGAAGCAGCTGCTCTAGAACAAAGAAAGATTGGCATTGGTGATGGATCAGTTGGGATGTTATCCTCACTACTTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTAGTAGTTACACGGATGCAGACTCATAGAAAAGAATCAAAAAAAACCATGCCTGGTCATAAGTTGTCTGTGGCCACGGAACAAACATTTCTTTCTGCAGCTGAGCCTCCTTCTTATGGAACTAGTCATGTGATTCAAGAAGTGTATGGTGAAGCTGGAGTCTGGGGTTTCTGGAAAGGTGTATTACCAACGTTGATCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAACCATGTTGTCAAGGTTAAAAAGAAGACGTGCTTTGAGTAAGAAGAGTAGTAATGGGGTTTCTGCTTTAGAGATATTTCTTCTTGGGGCTTTGGCTAAGCTTGGAGCTACTGTTATGACTTATCCTCTTCTAGTTGTGAAGGCTAGGCTTCAAGCAAGGCAGGTTAAGACTGAAGACAAGAGGCACCATTATAAAGGAACATGGGACGCCATTATAAAGATGATCCGCTATGAAGGGTTTTATGGATTTTACAACGGTATGAACACTAAAATTGCACAGAGTGTGCTGGCTGCCGCTGTTTTGTTCATGGTGAAGGAAGAGCTAGTTAACGGGGCTCGTTTCTTGCTTGCTAAGGATGCTGCTAACACTCTGAAGGCAAAGCCTCTATGA 1026 0.4483 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTEHDPKKDRRNLGTLEQMRQVVKHEGWDRLYGGLMPSLVGTAASQGVYYYFYQVFRSKAEAAALEQRKIGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKESKKTMPGHKLSVATEQTFLSAAEPPSYGTSHVIQEVYGEAGVWGFWKGVLPTLIMVSNPSIQFMLYETMLSRLKRRRALSKKSSNGVSALEIFLLGALAKLGATVMTYPLLVVKARLQARQVKTEDKRHHYKGTWDAIIKMIRYEGFYGFYNGMNTKIAQSVLAAAVLFMVKEELVNGARFLLAKDAANTLKAKPL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0080 341 Pfam Mitochondrial carrier protein 109 219 IPR018108 -
Prci15g0080 341 Pfam Mitochondrial carrier protein 233 320 IPR018108 -
Prci15g0080 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Prci15g0080 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Prci15g0080 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Prci15g0080 341 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
Prci15g0080 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 325 IPR044712 GO:0006862|GO:0055085
Prci15g0080 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Prci15g0080 341 Gene3D Mitochondrial carrier domain 5 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0080 Prci-Chr15 496183 502676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0080 24 328 Chloroplast and Mitochondria Gene Families AT2G47490 28.939 1.21e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0080 K13354 - qsa:O6P43_020242 536.954