Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0079 ATGTCGGACGCTTTGATCAATGGCCTCGCTGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATATCCTCTCCAAACTGTAAACACTCGTCAACAGACCGAGCATGATCCGAAGAAAGACCGGAGGAATCTTGGAACTCTTGAGCAAATGCGCCAGGTTGTAAAGCACGAAGGGTGGGATCGGTTGTACGGAGGATTGATGCCGTCGCTTGTGGGCACTGCTGCGTCTCAGGGTGTTTACTACTACTTCTATCAAGTATTTAGGAGCAAGGCTGAAGCAGCTGCTCTAGAACAAAGAAAGATTGGCATTGGTGATGGATCAGTTGGGATGTTATCCTCACTACTTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTAGTAGTTACACGGATGCAGACTCATAGAAAAGAATCAAAAAAAACCATGCCTGGTCATAAGTTGTCTGTGGCCACGGAACAAACATTTCTTTCTGCAGCTGAGCCTCCTTCTTATGGAACTAGTCATGTGATTCAAGAAGTGTATGGTGAAGCTGGAGTCTGGGGTTTCTGGAAAGGTGTATTACCAACGTTGATCATGTTCATGCTGTATGAAACCATGTTGTCAAGGTTAAAAAGAAGACGTGCTTTGAGTAAGAAGAGTAGTAATGGGGTTTCTGCTTTAGAGATATTTCTTCTTGGGGCTTTGGCTAAGCTTGGAGCTACTGTTATGACTTATCCTCTTCTAGTTGTGAAGGCTAGGCTTCAAGCAAGGCAGGTTAAGACTGAAGACAAGAGGCACCATTATAAAGGAACATGGGACGCCATTATAAAGATGATCCGCTATGAAGGGTTTTATGGATTTTACAACGGTATGAACACTAAAATTGCACAGAGTGTGCTGGCTGCCGCTGTTTTGTTCATGGTGAAGGAAGAGCTAGTTAACGGGGCTCGTTTCTTGCTTGCTAAGGATGCTGCTAACACTCTGAAGGCAAAGCCTCTATGA 1005 0.4498 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTEHDPKKDRRNLGTLEQMRQVVKHEGWDRLYGGLMPSLVGTAASQGVYYYFYQVFRSKAEAAALEQRKIGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKESKKTMPGHKLSVATEQTFLSAAEPPSYGTSHVIQEVYGEAGVWGFWKGVLPTLIMFMLYETMLSRLKRRRALSKKSSNGVSALEIFLLGALAKLGATVMTYPLLVVKARLQARQVKTEDKRHHYKGTWDAIIKMIRYEGFYGFYNGMNTKIAQSVLAAAVLFMVKEELVNGARFLLAKDAANTLKAKPL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0079 334 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 318 IPR044712 GO:0006862|GO:0055085
Prci15g0079 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 218 IPR018108 -
Prci15g0079 334 Pfam Mitochondrial carrier protein 109 205 IPR018108 -
Prci15g0079 334 Pfam Mitochondrial carrier protein 226 313 IPR018108 -
Prci15g0079 334 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Prci15g0079 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Prci15g0079 334 Gene3D Mitochondrial carrier domain 2 149 IPR023395 -
Prci15g0079 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 316 IPR018108 -
Prci15g0079 334 SUPERFAMILY Mitochondrial carrier 3 312 IPR023395 -
Prci15g0079 334 Gene3D Mitochondrial carrier domain 150 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0079 Prci-Chr15 496183 502681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0079 24 321 Chloroplast and Mitochondria Gene Families AT2G47490 28.296 3.13e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0079 K13354 - qsa:O6P43_020242 516.924