Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0066 ATGGGAATATCTAAAATCAAAGGCCGATCTCCACAACAGGGTCACATTTGTAGAGATGGAGAAGAAACCAAGCCAGTAATCACAATGGAGTGGAAACACTTGATAGACAACATAATCTTTGACTCGCTACATCATGATTTAACACCATTTGAGAAGTTTGATGTAAGCAAAGAAGAAGAAGATCGTATTATAGTTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATAGCTAGGCTTCTTCCAGGACGAACCGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAGGTGCTTGGATCTTCGAAGATACATACCGGTGGGAGCTGGCGTGGAAGAGGGCAGCCTTGAGGCCCCTGAAAAAATAAAGGCATCTTCCGAAGAAACCATGTCAGCAGGGTCTCCATTGAATCCTACACAAATTAAAAATGTCGGGATGGATGGTGGTATCAATCAGCACGAAGATAATCCTCCAAGAAACCATGGTGCTGAAGTGGAGGAATATCCTACCGTGTGTCAGCCAGTAGCACGTGTTAGTGCATTCAGTGTCTATAATCCTCCAAGCAGGCCAACAACTGGATCCACGTACTCAAGGATGCTCCCAATGCATGGCCCTTTGATCCAATCGTCCAAACTCAAAGTAGGTGCCTACAAGCTATTTGAAGATGTTGGCTGTGAACCCATGGTTCCCGTGCAATGTGGTCATGGCTGCTGTTCTGCAAGTTCTCAGGAAAGCCATTCTCATGAGTCGCTGCTAGGTCCTGAGTTCGCTGACTATGCGGAGCCCCCCTCTTTAACAAGTCATGATTTGATCTCTATAGCTACAGATTTGAACAATATTGCTTGGATCAAGAGTGGCCTAGATGCCAGAGTAACGGAGAATGCAGCAAACTTGACGCCATCTCAAGGCGTTACTACTGCCTTCCAAAATTGCTTCTTTGAGGAGGGAGCAAGCAAGTTTGTGGGTGTGATGCAAGACATGTTAACAACGCAGAAGTCTAGCCATCCATTTGCAATGCCTGCAGAGGTTTGA 1044 0.454 MGISKIKGRSPQQGHICRDGEETKPVITMEWKHLIDNIIFDSLHHDLTPFEKFDVSKEEEDRIIVAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCLDLRRYIPVGAGVEEGSLEAPEKIKASSEETMSAGSPLNPTQIKNVGMDGGINQHEDNPPRNHGAEVEEYPTVCQPVARVSAFSVYNPPSRPTTGSTYSRMLPMHGPLIQSSKLKVGAYKLFEDVGCEPMVPVQCGHGCCSASSQESHSHESLLGPEFADYAEPPSLTSHDLISIATDLNNIAWIKSGLDARVTENAANLTPSQGVTTAFQNCFFEEGASKFVGVMQDMLTTQKSSHPFAMPAEV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0066 347 CDD SANT 58 98 IPR001005 -
Prci15g0066 347 MobiDBLite consensus disorder prediction 1 20 - -
Prci15g0066 347 ProSiteProfiles Myb-like domain profile. 58 98 IPR001005 -
Prci15g0066 347 PANTHER MYB PROTEIN-RELATED 56 157 - -
Prci15g0066 347 SUPERFAMILY Homeodomain-like 58 101 IPR009057 -
Prci15g0066 347 Pfam Myb-like DNA-binding domain 58 97 IPR001005 -
Prci15g0066 347 Gene3D - 57 101 - -
Prci15g0066 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 102 IPR017930 -
Prci15g0066 347 SMART sant 52 100 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0066 Prci-Chr15 387677 392373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0066 45 335 MYB Transcription Factor Family AT3G55730 40.717 4.34e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci15g0066 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0066 K09422 - gmx:100781228 338.961