Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0046 ATGGAATCCACGTCTTACAAGTTTCTCCTCTTCACGGCGGCGCTGCTAGCATGCGCCGGCTATGGACTGTCCCTCACGCGCTGCCCTAACTGCGGCATCACCTCAGTACCCTACCCCCTCAGCATCTCTCCCAACTGTGGCGACCCCTCCTACAAGATCCGCTGCAGCTCCGGCTCCCTCGTCTTCGACACCCTCAATAACTCCTACCCCATCGAGTCCATCGAGCCCCAGACCCAGCGCCTTGTCATCCGACCCGCACCCCTCCTGTCCAACACCTGCGTCACCGCTGATAAGATCCACGGAGGCATCCGCCTCAACAGCACCCTCCCCTTCAACATCACCAGCAGCAACACCATCGTCTACCTCAACTGCACCGACACGCTCCTCCTCTCCCCCTTGGATTGCTCCTCCTCCAGCTTGTGTCACACCTACATCAACGGCACCGGAGACGCGACTCCTTGCGAGGACACGCCTATATGCTGTACTTTCAGGGCCGGTGGGTCAAGCAACTCCTACATGATTCGGGTCCGGGACGTGGGATGCAGCGCCTACTCTAGCTTCGTGAACCTGAACCCGTCCCTGCCACTGAGCAGCTGGCCTGAACCGGGGCTGGAAATTCAGTGGGTGTCGCCGAAAGAACCGATCTGCAGGTCCCAGGGGGATTGCGAGGGCGGGAACTCCACTTGCGCCCCGGACCCATCGACATCGAGAAACGGCATCAAGAGGTGCTTCTGTAACACCGGCCTCGTGTGGGACCCTTTTCAAGGGGTGTGCTCTGAACGAATCACGTGTCGAAGTCCGAATGGTTGCGGCGGCTCTTCGAATCGGACTGCACTGATAGCAGGTTTAACGAGCGGGATTTGCGCAGCACTGATAGTGGCCGTCATTGCGCTTCTTCTCTACAAACGCCACAAACGTATCAAGGAGGCCCGGGAACGCCTGGTCAGGGAGCGAGAGGGTATCCTGAATGCAAGCGGGGGAGGCAGAGCCGCCAAGCTCTTCTCTGGCAGAGAACTGAAGAAAGCTACCAACAACTTCTCCGGAGACAGCCTCCTCGGGGCCGGCGGCTACGGCGAAGTCTATAAAGGCATTCTCCACGACGGCAGCCTCGTGGCCGTCAAATGCGCAAAGCTCGGGAACGCCAAAGGCACCGACCAAGTCCTGAACGAGGTGCGCATATTATGCCAGGTCCACCACCGCAACCTCGTCGGCCTTCTGGGTTGCTGTGTGGAGTTAGAGCAGCCCACGATGGTGTATGAGTTCATAGAGAACGGGACTCTCCTCGATCACTTGCAAGGCCAAAATATGTCCAAACGGCGGGGTTCTCTGACTTGGTCTAATCGCCTTCGAATAGCTCACGACACGGCACAAGGTCTAGCGTATCTCCACTTCTCGGCTGTGCCTCCTATATACCACAGGGACGTCAAATCCAGTAACATTCTGTTAGATAATAAATTAAATGCCAAGGTTTCAGATTTTGGTTTGTCGAGGCTGGCTGAAACAGATTTGAGCCATATCTCGACTTGTGCTCAGGGGACGCTTGGGTATTTAGATCCAGAGTATTATAGGAATTACCAATTAACGGATAAGAGCGACGTGTATAGTTTTGGGGTGGTATTGTTAGAACTTTTGACGGCGCAGAAAGCTATAGATTTTAACAGGGCTGCGGATGATGTGAACTTGGCGGTTTATGTGCAGAGGATGGCGGAAGAAGAGATGTTGATGGAGGTGATAGATCCAGGGTTGACAAATGGAGCGACAACTTTGGAAGTGGATACTATGAAGGCTTTGGCGTTTTTGGCTCTGGGATGCTTGGAGGAGCGCAGGCAGAACCGACCTTCGATGAAAGAGGTTGTTGAGGAGATTGACTATATCATTGGTATTGCCTCCGCACAAGATACCCGAACTTAA 1911 0.5484 MESTSYKFLLFTAALLACAGYGLSLTRCPNCGITSVPYPLSISPNCGDPSYKIRCSSGSLVFDTLNNSYPIESIEPQTQRLVIRPAPLLSNTCVTADKIHGGIRLNSTLPFNITSSNTIVYLNCTDTLLLSPLDCSSSSLCHTYINGTGDATPCEDTPICCTFRAGGSSNSYMIRVRDVGCSAYSSFVNLNPSLPLSSWPEPGLEIQWVSPKEPICRSQGDCEGGNSTCAPDPSTSRNGIKRCFCNTGLVWDPFQGVCSERITCRSPNGCGGSSNRTALIAGLTSGICAALIVAVIALLLYKRHKRIKEARERLVREREGILNASGGGRAAKLFSGRELKKATNNFSGDSLLGAGGYGEVYKGILHDGSLVAVKCAKLGNAKGTDQVLNEVRILCQVHHRNLVGLLGCCVELEQPTMVYEFIENGTLLDHLQGQNMSKRRGSLTWSNRLRIAHDTAQGLAYLHFSAVPPIYHRDVKSSNILLDNKLNAKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQKAIDFNRAADDVNLAVYVQRMAEEEMLMEVIDPGLTNGATTLEVDTMKALAFLALGCLEERRQNRPSMKEVVEEIDYIIGIASAQDTRT 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0046 636 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 26 625 IPR044652 GO:0004672
Prci15g0046 636 Pfam Protein tyrosine and serine/threonine kinase 350 621 IPR001245 GO:0004672|GO:0006468
Prci15g0046 636 Gene3D Transferase(Phosphotransferase) domain 1 422 634 - -
Prci15g0046 636 FunFam Wall-associated receptor kinase-like 20 422 635 - -
Prci15g0046 636 Gene3D Phosphorylase Kinase; domain 1 324 421 - -
Prci15g0046 636 SUPERFAMILY Protein kinase-like (PK-like) 331 620 IPR011009 -
Prci15g0046 636 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci15g0046 636 FunFam Wall-associated receptor kinase-like 20 308 421 - -
Prci15g0046 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Prci15g0046 636 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0046 636 CDD STKc_IRAK 352 623 - -
Prci15g0046 636 SMART serkin_6 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0046 636 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0046 Prci-Chr15 276240 284228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0046 5 636 Receptor kinase-like Gene Family AT5G02070 51.970 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci15g0046 PK_Tyr_Ser-Thr 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0046 - - gmx:100305415 976.081