Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0045 ATGCAATTTCAGAATCAGGTTGGGGGTTACAAAAGATTTTTCAGAAGAACACTATTAGAAACTTCAGAGTATCTGAAAGATGATTGCCTTGTCATGCATTGCACTGTTGGTGTGGTCCAAACACGTTTTGAGAGAAGTAAACAGAGTATTATTGTACCACGGTCAGACATGGGTCAAGATTTTAAGGGCTTGTTAGAAACTGGGGTTGGTTGCGACATACTTTTCAAGGTCAAGAATGAAAGTTTTGAAGCTCATAAGTTGGTACTTGCAGCCCGGTCTCCTGTGTTTAGAGCACAGTTTTTTGGACTTGTTGGGGATCCTTGCATAAATGAAGTAGTGGTGGAGGATATCGAGCCATTTATCTTCAAGGTAATGCTTCTCTTCATATATACCGACGAACTTCCTGATATCTATAATGCTGTGGATTCAGTGGCACTGCCCATGTGCACACATACCGCCATGATGCAGCATCTCTTGGCTGCTGCTGATCGGTATAATCTTGATCGTCTGAAATCATTATGTGAATCAAAATTGTGTGAAGATATCAGCACTGATACTGTTGCAACAACACTTGCACTGGCTGAGCAACACCACTGCCCCGAGCTTAAGGCCATCTGTTTAAAATTTATTGTGAATCCATCGAACTTGGGAGCGGTAATGCAGTCTGAAGCATTCATGCACTTGAAAGAGAGCTGTCCCTCCATGTTGTTGGAGTTGTTGGAGGCATTTGCATCGGCAGATGAAAACTCGAGCCAGACATTGAGCAGGAAGAGAAGTGGCAGCAGCATATATGGGCAAGATTTAGCAGATGAGGGTGCTGCCGAATCAGTTAATCCAAACGTTAGACGTGTCAGGAGGCGGGCATAG 867 0.4371 MQFQNQVGGYKRFFRRTLLETSEYLKDDCLVMHCTVGVVQTRFERSKQSIIVPRSDMGQDFKGLLETGVGCDILFKVKNESFEAHKLVLAARSPVFRAQFFGLVGDPCINEVVVEDIEPFIFKVMLLFIYTDELPDIYNAVDSVALPMCTHTAMMQHLLAAADRYNLDRLKSLCESKLCEDISTDTVATTLALAEQHHCPELKAICLKFIVNPSNLGAVMQSEAFMHLKESCPSMLLELLEAFASADENSSQTLSRKRSGSSIYGQDLADEGAAESVNPNVRRVRRRA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0045 288 CDD BTB_POZ_BPM_plant 57 179 - -
Prci15g0045 288 FunFam BTB-POZ and math domain 1 47 176 - -
Prci15g0045 288 ProSiteProfiles BTB domain profile. 71 134 IPR000210 GO:0005515
Prci15g0045 288 CDD MATH 9 36 IPR002083 GO:0005515
Prci15g0045 288 MobiDBLite consensus disorder prediction 251 288 - -
Prci15g0045 288 Gene3D Potassium Channel Kv1.1; Chain A 47 177 IPR011333 -
Prci15g0045 288 SMART BTB_4 71 182 IPR000210 GO:0005515
Prci15g0045 288 SUPERFAMILY POZ domain 53 180 IPR011333 -
Prci15g0045 288 CDD BACK_AtBPM-like 179 242 IPR034090 -
Prci15g0045 288 SUPERFAMILY TRAF domain-like 8 38 - -
Prci15g0045 288 Gene3D - 181 262 - -
Prci15g0045 288 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 6 238 IPR045005 GO:0016567
Prci15g0045 288 Pfam BTB/POZ domain 61 180 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0045 Prci-Chr15 269436 272959 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci15g0045 BTB 1.8e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0045 K10523 - gmx:100786636 457.218