Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0025 ATGCCTAGACCACTGGAGTTGGAGGCAAAGGCATGTTGGCCCAAGCTTGCGGTCTCAAAGCAAAACGTTGGAGCTGGAGGCCGTTCATTTGGGCAGCTGGGCATAGTGAACTGTGATAATGGTTTTTCTGGAGTTTGGGGTTGCCTACTGGGGTCCAAAAACAAGCTGAAGCCACCTGTCATTGTAACCAAAGAAAACCCAAACGTGCTTCAAAGCCATGTGTTGGAAATTGAAAGTGGCAGTGACATTGTTAAGAGCATAGCCACCTTCGCGAACCGCCGATGTCAAGGGGTATCAGTACTTAGTGGAAGCGGCGTTATGAGCAACATCACACTCCGACAACCGATGGCACTTGGCGAGGTAATTACACTGAATGAAAGGTTCAAGATATTGTCCCTCTCTAGGGCATTCTTACTGGTGCCTTCACTGCCAGGAGCCACTGGGCTAACTGTGTATTTAGCCGACAAACAAGGGCAGGTAGTTGGGGGTACAATGGTAGGTTCTCTGGAGGCTTCGGGGCCCATGATGGTGATCGCGGTAACATTTGGCAATGCCACTTACAAGAGGCTACTATTGAAGGAAGAGGCGGGTGGTGAGGAAACGCAGGCGACGCAAACAGGAGTCAATGCAAGAAGTACATGA 642 0.5016 MPRPLELEAKACWPKLAVSKQNVGAGGRSFGQLGIVNCDNGFSGVWGCLLGSKNKLKPPVIVTKENPNVLQSHVLEIESGSDIVKSIATFANRRCQGVSVLSGSGVMSNITLRQPMALGEVITLNERFKILSLSRAFLLVPSLPGATGLTVYLADKQGQVVGGTMVGSLEASGPMMVIAVTFGNATYKRLLLKEEAGGEETQATQTGVNARST 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0025 213 CDD DUF296 73 182 IPR005175 -
Prci15g0025 213 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
Prci15g0025 213 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 194 - -
Prci15g0025 213 Gene3D - 71 206 - -
Prci15g0025 213 ProSiteProfiles PPC domain profile profile. 67 204 IPR005175 -
Prci15g0025 213 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 50 208 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0025 Prci-Chr15 211506 214473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0025 51 207 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.962 8.77e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0025 - - pcin:129294508 408.297