Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0012 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGATTTCAATCGATGGTAATACAGAAGAGGATGGTTTGAGTGGTCTAAGTGACAAGATCTCTGCTCCCTCTGTGCCTCCAACTCCCCGGTCAGAGGGTGAGATCCTGAAATCCTCCAACATGAAGAACTTCAGCTTCAATGAGCTAAGAGCTGCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTCGGATGTGTATTTAAGGGGTGGATTGATGAGTATACACTTGCACCAGTTAAACCAGGGATTGGGCTTGTGATTGCTGTGAAGAGGCTTAACCAAGAAGGCCTTCAGGGACACACTGAGTGGCTGACAGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTAGTAAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTATGAATTTTTGGCTAAGGGAAGTTTGGATAATCACTTGTTTAGGAGGTCGTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTGGCATTTCTTCACAGTGACCCAGTTAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCGAACTACAATGCAAAGCTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGCAGATGACAAGAGCCATGTCTCTACTAGAGTAATGGGAACCTTTGGCTATGCTGCTCCTGAGTATATCGCCACAGGCCACTTGACTAAAAGGAGTGATGTATACAGTTTTGGGGTTGTTCTCCTCGAAATCATATCTGGCAAACGTGCATTGGACAATAACCGGCCTTCTGGGGAGCATAATTTAGTTGAATGGGCAAAGCCTCACCTAACCAGCAAACGGCGGATTTTCCAAGTTATAGATGCTCGTATTGACGGTCAGTGCTCTCAGCGGGAAGCAATGGAAGTGGCTAGCCTAACACTTAAATGCTTGTCTGTAGAACCCAAACTGCGACCAAACATGGAGGTGGTGGTCAGGGCATTGGAACAACTTCAGGATTCGTGTGACATGGCTACGGTGGGAGCGAGCTCGCAAAATAAGACTGTCAAAAGCAGTCATAGCTTAAGTAGCAATGGTCCTAAGCAGCACGGAAGAAGCATAAATGGATCTTCAAATGGAGAAGGTACTTCTACGCAAACGCGATCGGCCTCTCCTCTATGTACTTAA 1251 0.4588 MGCCFSARIKAESPPRNGLISIDGNTEEDGLSGLSDKISAPSVPPTPRSEGEILKSSNMKNFSFNELRAATRNFRPDSVVGEGGFGCVFKGWIDEYTLAPVKPGIGLVIAVKRLNQEGLQGHTEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRSSYFQPLSWSIRMKVALDAAKGLAFLHSDPVKVIYRDFKTSNILIDSNYNAKLSDFGLAKDGPADDKSHVSTRVMGTFGYAAPEYIATGHLTKRSDVYSFGVVLLEIISGKRALDNNRPSGEHNLVEWAKPHLTSKRRIFQVIDARIDGQCSQREAMEVASLTLKCLSVEPKLRPNMEVVVRALEQLQDSCDMATVGASSQNKTVKSSHSLSSNGPKQHGRSINGSSNGEGTSTQTRSASPLCT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0012 416 Gene3D Transferase(Phosphotransferase) domain 1 160 383 - -
Prci15g0012 416 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Prci15g0012 416 MobiDBLite consensus disorder prediction 31 52 - -
Prci15g0012 416 MobiDBLite consensus disorder prediction 370 416 - -
Prci15g0012 416 PANTHER OS01G0588500 PROTEIN-RELATED 47 360 - -
Prci15g0012 416 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Prci15g0012 416 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Prci15g0012 416 CDD STKc_IRAK 80 359 - -
Prci15g0012 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci15g0012 416 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Prci15g0012 416 SUPERFAMILY Protein kinase-like (PK-like) 52 361 IPR011009 -
Prci15g0012 416 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Prci15g0012 416 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0012 Prci-Chr15 95430 98956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0012 1 356 Glycoside Hydrolase AT3G07070 43.869 1.77e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci15g0012 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0012 - - gmx:100775335 643.269