Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0011 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGATTTCAATCGATGGTAATACAGAAGAGGATGGTTTGAGTGGTCTAAGTGACAAGATCTCTGCTCCCTCTGTGCCTCCAACTCCCCGGTCAGAGGGTGAGATCCTGAAATCCTCCAACATGAAGAACTTCAGCTTCAATGAGCTAAGAGCTGCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTCGGATGTGTATTTAAGGGGTGGATTGATGAGTATACACTTGCACCAGTTAAACCAGGGATTGGGCTTGTGATTGCTGTGAAGAGGCTTAACCAAGAAGGCCTTCAGGGACACACTGAGTGGCTGACAGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTAGTAAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTATGAATTTTTGGCTAAGGGAAGTTTGGATAATCACTTGTTTAGGAGGTCGTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTGGCATTTCTTCACAGTGACCCAGTTAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCGAACTACAATGCAAAGCTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGCAGATGACAAGAGCCATGTCTCTACTAGAGTAATGGGAACCTTTGGCTATGCTGCTCCTGAGTATATCGCCACAGTTTTGGGGTTGTTCTCCTCGAAATCATATCTGGCAAACGTGCATTGGACAATAACCGGCCTTCTGGGGAGCATAATTTAG 861 0.453 MGCCFSARIKAESPPRNGLISIDGNTEEDGLSGLSDKISAPSVPPTPRSEGEILKSSNMKNFSFNELRAATRNFRPDSVVGEGGFGCVFKGWIDEYTLAPVKPGIGLVIAVKRLNQEGLQGHTEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRSSYFQPLSWSIRMKVALDAAKGLAFLHSDPVKVIYRDFKTSNILIDSNYNAKLSDFGLAKDGPADDKSHVSTRVMGTFGYAAPEYIATVLGLFSSKSYLANVHWTITGLLGSII 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0011 286 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Prci15g0011 286 MobiDBLite consensus disorder prediction 31 52 - -
Prci15g0011 286 ProSiteProfiles Protein kinase domain profile. 74 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0011 286 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Prci15g0011 286 Gene3D Transferase(Phosphotransferase) domain 1 160 270 - -
Prci15g0011 286 Pfam Protein tyrosine and serine/threonine kinase 78 269 IPR001245 GO:0004672|GO:0006468
Prci15g0011 286 PANTHER OS01G0588500 PROTEIN-RELATED 46 261 - -
Prci15g0011 286 SUPERFAMILY Protein kinase-like (PK-like) 48 267 IPR011009 -
Prci15g0011 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci15g0011 286 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Prci15g0011 286 FunFam Os07g0541700 protein 160 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0011 Prci-Chr15 95411 98591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0011 1 269 Glycoside Hydrolase AT3G07070 43.929 1.26e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci15g0011 PK_Tyr_Ser-Thr 9.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0011 - - gmx:100800735 467.233