Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0008 ATGGGTTTCTCTCCTCCAGGAACAATCTGGATTGGCTCTTGTGAGTCTTCCAATGCTCCGTCTTCGTCCTATCTAGTTGCAGATCACTCCTGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGAAGCTTGGCTTTGCCTGCGTTACCCTGCCTCGACGCCGGCCAATCTTGCGTAAAAACGACGGCGACGGATATAGAAAGACGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCGGAGTCTGGTGGATGTGGAGCAGAAGCGACGAATGCTGACCCACAATCTGTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCACAGGTTGAGCTCGAATCCTCGAGCATGCATTCTTCCGCTGCTGCAACCGTTTTGATGGTTAATCTGGACAATGGAATGCATAATTCTGGGGCTCGAGAGCAGAAATGGCGGAGGATGGAGACCTTGGAAAAAAGCATATCCCCTGTTGCCAACACTTTGATCAGGTTCAACTACGGTGAAATTATATGTGCTACTCGCAATTTCTCCAAAGGCAGGGTATTGGGGAGAGGGGCCTTGAGCTGTGTATTTAGGGGCAGAGTTGGGCTTTTGAGGACTGCTGTAGCTATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCGTTCGGTAGAGAACTGATGATTGCCAGTTCTCTTCATAACCCAAACGTTGTTCCGCTTGTGGGTTTTTGTATTGACCTGGAGGAGGGTTTATTTCTGGTGTACAAATATGTCTCCGGGGGCAGCCTAGAACATCATTTGCATGAAAGGAAGTTTGTGAAGGGTAGTTCACCACTTCCCTGGTCTGTGAGGTATAAAGTTGCGATTGGAATTGCGGAAGCCATGGCTTATCTGCATAACGGAACTGAAAGATGCATTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCCTCTAAAAAGACACCCAAGTTAGGCGATTTTGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTCTCCTCTGCAAAACAGTCAAGGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGAAAAGTATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAAGCCAATAGAAGCAGAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGAAAAACCAAAATGTATTGAGCATAACTTTCTGCTGCTATCAAATAGTCCTGTCCATTAACTTTTTCTGA 1269 0.4547 MGFSPPGTIWIGSCESSNAPSSSYLVADHSCDYKLKFRTILRKMIWKLGFACVTLPRRRPILRKNDGDGYRKTNLEHNKAWLLAESGGCGAEATNADPQSVHSSFRFSFCSQVELESSSMHSSAAATVLMVNLDNGMHNSGAREQKWRRMETLEKSISPVANTLIRFNYGEIICATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFGRELMIASSLHNPNVVPLVGFCIDLEEGLFLVYKYVSGGSLEHHLHERKFVKGSSPLPWSVRYKVAIGIAEAMAYLHNGTERCIVHRDIKPSNILLSSKKTPKLGDFGLATWTSAPSVPLLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAEKPPGEENLVLWKNQNVLSITFCCYQIVLSINFF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0008 422 ProSiteProfiles Protein kinase domain profile. 179 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0008 422 Gene3D Phosphorylase Kinase; domain 1 139 256 - -
Prci15g0008 422 SUPERFAMILY Protein kinase-like (PK-like) 159 402 IPR011009 -
Prci15g0008 422 Gene3D Transferase(Phosphotransferase) domain 1 257 413 - -
Prci15g0008 422 PANTHER OS08G0249100 PROTEIN 113 400 IPR046958 -
Prci15g0008 422 SMART serkin_6 179 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0008 422 Pfam Protein kinase domain 180 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0008 422 FunFam probable serine/threonine-protein kinase PBL7 140 256 - -
Prci15g0008 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0008 Prci-Chr15 17140 20021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0008 167 400 Trihelix Transcription Factor Family AT1G70460 45.299 1.55e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci15g0008 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0008 - - zju:107416245 644.039