Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0006 ATGGGTTTCTCTCCTCCAGGAACAATCTGGATTGGCTCTTGTGAGTCTTCCAATGCTCCGTCTTCGTCCTATCTAGTTGCAGATCACTCCTGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGAAGCTTGGCTTTGCCTGCGTTACCCTGCCTCGACGCCGGCCAATCTTGCGTAAAAACGACGGCGACGGATATAGAAAGACGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCGGAGTCTGGTGGATGTGGAGCAGAAGCGACGAATGCTGACCCACAATCTGTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCACAGGTTGAGCTCGAATCCTCGAGCATGCATTCTTCCGCTGCTGCAACCGTTTTGATGGTTAATCTGGACAATGGAATGCATAATTCTGGGGCTCGAGAGCAGAAATGGCGGAGGATGGAGACCTTGGAAAAAAGCATATCCCCTGTTGCCAACACTTTGATCAGGTTCAACTACGGTGAAATTATATGTGCTACTCGCAATTTCTCCAAAGGCAGGGTATTGGGGAGAGGGGCCTTGAGCTGTGTATTTAGGGGCAGAGTTGGGCTTTTGAGGACTGCTGTAGCTATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCGTTCGGTAGAGAACTGATGATTGCCAGTTCTCTTCATAACCCAAACGTTGTTCCGCTTGTGGGTTTTTGTATTGACCTGGAGGAGGGTTTATTTCTGGTGTACAAATATGTCTCCGGGGGCAGCCTAGAACATCATTTGCATGAAAGGAAGTTTGTGAAGGGTAGTTCACCACTTCCCTGGTCTGTGAGGTATAAAGTTGCGATTGGAATTGCGGAAGCCATGGCTTATCTGCATAACGGAACTGAAAGATGCATTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCCTCTAAAAAGACACCCAAGTTAGGCGATTTTGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTCTCCTCTGCAAAACAGTCAAGGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGAAAAGTATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAAGCCAATAGAAGCAGAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGAAAGGGAAGGGAGCCATCGAAGAGTTGCTGGATCCTCAACTCAAGTGCAGTTTGAGATGCTCAAATCAGATGGCTCAGATGGTTGAAGCAGCAGCTGCTTGTGTTACAAATGAAGAATCTCGGAGACCTGGGATACAAGAGATTATTGCAATACTGAGAGGTCAAGAAGAGCGTGTCTTGCTTAAAAGGAAGAAGTCTGGTCTACTTGGGAATGGGTTGGGAGTTGATTGCTACCCTCAACTACAACAAACAAATAACGAGATGAGAAGACACTTGGCTCTGGCAATGCTAGGAGTTTCAGAGTTCGAGGATGATGAGTATCTATATGGTCGTTGA 1536 0.459 MGFSPPGTIWIGSCESSNAPSSSYLVADHSCDYKLKFRTILRKMIWKLGFACVTLPRRRPILRKNDGDGYRKTNLEHNKAWLLAESGGCGAEATNADPQSVHSSFRFSFCSQVELESSSMHSSAAATVLMVNLDNGMHNSGAREQKWRRMETLEKSISPVANTLIRFNYGEIICATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFGRELMIASSLHNPNVVPLVGFCIDLEEGLFLVYKYVSGGSLEHHLHERKFVKGSSPLPWSVRYKVAIGIAEAMAYLHNGTERCIVHRDIKPSNILLSSKKTPKLGDFGLATWTSAPSVPLLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAEKPPGEENLVLWKGKGAIEELLDPQLKCSLRCSNQMAQMVEAAAACVTNEESRRPGIQEIIAILRGQEERVLLKRKKSGLLGNGLGVDCYPQLQQTNNEMRRHLALAMLGVSEFEDDEYLYGR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0006 511 ProSiteProfiles Protein kinase domain profile. 179 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0006 511 PANTHER OS08G0249100 PROTEIN 127 465 IPR046958 -
Prci15g0006 511 FunFam Putative receptor-like serine/threonine-protein kinase 257 467 - -
Prci15g0006 511 FunFam probable serine/threonine-protein kinase PBL7 140 256 - -
Prci15g0006 511 Gene3D Phosphorylase Kinase; domain 1 139 256 - -
Prci15g0006 511 Gene3D Transferase(Phosphotransferase) domain 1 257 467 - -
Prci15g0006 511 SMART serkin_6 179 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0006 511 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Prci15g0006 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Prci15g0006 511 Pfam Protein kinase domain 180 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0006 Prci-Chr15 16826 20020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0006 167 496 Trihelix Transcription Factor Family AT1G70460 38.889 3.46e-64 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci15g0006 Pkinase 6.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0006 - - gmx:100808074 809.675