Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1595g0002 ATGGGGAGAGAAACTTGGTGGGTCCTTCTCCTTCTCTCAATAACACTGCTCTTTCCGAATGAAAGCCATGGAAGTAGAAGTGGGCAAGAACAAGCCCTCAAGAATCTGAATAAAGCCAAATTCTGGGGAGCTTCCGTTGACAGAAGCAGTGAAACAATCAAAGACGTGTTTGGTGACGATGATCGTTACTATTATCCTCAACAAGGATTCAAAGAGAAAGATAGAATACAGAGACTTCCAGGACAGCCTCAAGGTGTGAATCTCTCTCAATATGGAGGGTATGTTACTGTGGATAAGATTGCAGGGCGAGCTTTTTATTATTATTTTGTTGAAGGTCAACAGCCTCACCAGCACAAATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGATGCTCGTCTCTAGCATACGGAGCAATGCAAGAAGTGGGACCCCTTCGAGTGAATAGTGACGGCAAAACACTTCACGCCAATGAATATTCATGGAACCACGCTGCAAACGTATTGTTTGTGGAATCACCAGCAGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTATGACAAAAATGGAGACAAAAGAACTGCTGAAGACAACTATGCATTCTTAAGAAATTGGTTAGAGAGATTTCCTGAGTATAAATCCTCTGATTTCTACATTGCTGGTGAGAGTTATGCTGGCCATTATGTTCCTCAACTTGCTCACACCATTCTTCATCACAACCACCACCCAAACTCCACCTTCGTCATCAACCTCAAAGGCGTCTTGATAGGGAATGCTGTGATAAATGACGATACAGACAACAGAGGAGTGTGGGATTTTTTGGCAAGCCATGCCATAATATCAGACCATGCAGCACGTGATGTGAACAAATTGTGCGATTTCTCAGAGACTGTCTCTAATCAAAGCAGTGAATGTAGAGCAGCTTTGGCTGAAATAGAGGAAGATATTGACAACATCGATATCTTCAACATCTATGCTCCTCAATGCATTGATTCCAACCTCACCTCCGTCCCTAAGCTTACCTCTGCAGTGATAGACCCATGCAGTGAATTTTATGTGAAAGCATACATGAACCGGGCTGAGGTGCAAGAGGCATTACATGCCAATGTCACGAAACTCACACATCACTGGACACTCTGTGGAGGTTTCGAATGGACTGATAGCCCTTCCACTGTTCTTCCACTCTTACAAGAGTTCCTCGATCATAGCCTTCGTGTTTGGATTTTCAGTGGTGACGTGGATGGAGTAGTGCCAGTAACTTCAACCAAGTATTCCATGGAGAAGCTGAATCTCACTGTTAAAACGGCTTGGCATCCTTGGTTCGTTAAAGGAGAGGTTGGAGGATACACACAAGTGTATGCGGGAGACATGAGATTTGCAACAGTGAGAGGAGCAGGACATGCAGTCCCAAGCTACAAGCCTGCAAGAGCTCTTTCTCTGCTCATTCACTTCTTACAAGGCATCCCTCTTCCTAATACCACTACTTCATCAATGCTCATTTGA 1509 0.4414 MGRETWWVLLLLSITLLFPNESHGSRSGQEQALKNLNKAKFWGASVDRSSETIKDVFGDDDRYYYPQQGFKEKDRIQRLPGQPQGVNLSQYGGYVTVDKIAGRAFYYYFVEGQQPHQHKLPLLLWLNGGPGCSSLAYGAMQEVGPLRVNSDGKTLHANEYSWNHAANVLFVESPAGVGFSYSNKTSDYDKNGDKRTAEDNYAFLRNWLERFPEYKSSDFYIAGESYAGHYVPQLAHTILHHNHHPNSTFVINLKGVLIGNAVINDDTDNRGVWDFLASHAIISDHAARDVNKLCDFSETVSNQSSECRAALAEIEEDIDNIDIFNIYAPQCIDSNLTSVPKLTSAVIDPCSEFYVKAYMNRAEVQEALHANVTKLTHHWTLCGGFEWTDSPSTVLPLLQEFLDHSLRVWIFSGDVDGVVPVTSTKYSMEKLNLTVKTAWHPWFVKGEVGGYTQVYAGDMRFATVRGAGHAVPSYKPARALSLLIHFLQGIPLPNTTTSSMLI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1595g0002 502 Gene3D - 350 385 - -
Prci1595g0002 502 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Prci1595g0002 502 FunFam Carboxypeptidase 70 333 - -
Prci1595g0002 502 Gene3D - 394 489 - -
Prci1595g0002 502 Pfam Serine carboxypeptidase 80 488 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 FunFam Carboxypeptidase 394 489 - -
Prci1595g0002 502 SUPERFAMILY alpha/beta-Hydrolases 72 493 IPR029058 -
Prci1595g0002 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 476 IPR001563 GO:0004185|GO:0006508
Prci1595g0002 502 Gene3D alpha/beta hydrolase 70 333 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1595g0002 355 492 Calmodulin-binding Proteins AT2G22960 30.216 6.47e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1595g0002 K16297 - pcin:129316698 758.059