Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci158g0005 ATGTCCGCCGCTGAACCGCCGATCTCCGCCACCGGCACGAGCCTCGGCTATGGCATTGCCATTGCGATCAGCATTCTCGTCCTCATCTCCACTATCATGCTTGCTTCTTATGCTTGCGTCCGGATCAAGGCCAACAGCCGCGGCCTTAACCGCCGCCGTGTAGGTAGTAGTAGTAACAGTAGTTCCGATGAGCCGGTCGTGGTAGTTTTGGGCCTGGACAAGCCCACGATTGAAGCCTTCCCGAAGATTGTGTTGGGGGAGAGTCGGCGATTGCCCAGGCCCAATGGAGGCCCATGCGCGATTTGCTTGGGAGAGTATGTGAAGAATGATTCAGTGCGGTGCGTTCCAGATTGCAACCACTGCTTCCACGTGGAATGCTTGGACGAGTGGCTCCGTCTGAGCGCCACGTGTCCTCTGTGTCGGAACTCTCCAGCTCCGTCGCCGGTGCCGACGCCGGTTGCTACGCCTCTGTCAGAATTGGTTCCGCTGGCTGCTGCTCACGCCAGGCGTAGAGTGGATGAATAG 525 0.5848 MSAAEPPISATGTSLGYGIAIAISILVLISTIMLASYACVRIKANSRGLNRRRVGSSSNSSSDEPVVVVLGLDKPTIEAFPKIVLGESRRLPRPNGGPCAICLGEYVKNDSVRCVPDCNHCFHVECLDEWLRLSATCPLCRNSPAPSPVPTPVATPLSELVPLAAAHARRRVDE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci158g0005 174 SMART ring_2 99 140 IPR001841 -
Prci158g0005 174 PANTHER RING-H2 FINGER PROTEIN ATL67 11 171 IPR044289 GO:0016567|GO:0016740
Prci158g0005 174 CDD RING-H2_EL5-like 99 141 - -
Prci158g0005 174 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Prci158g0005 174 Pfam Ring finger domain 99 141 IPR001841 -
Prci158g0005 174 SUPERFAMILY RING/U-box 98 146 - -
Prci158g0005 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 146 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci158g0005 1 164 C3H Transcription Factor Family AT5G07040 62.195 8.72e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci158g0005 - - tcc:108663824 221.861