Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1587g0004 ATGGCACAACAAGCAAGATCTTGTTCCCTCACTTACAAATGGACTTATGACGTGTTTCTTAGTTTTCACGGTGCAGATACTCGCTTAGGTTTCATTGGCTATCTCCGCGAGGCTCTGCGCCAAAGAGGAATTCATGTCTTCATTGATGATGAAGGCATCAGAACTGGAGAAGAAATCAAACCTGCACTTTTCAAAGCCATACGAGAATCAAGAATAGCGATCGTGGTTTTCTCTGAAAACTTTGCAAACTCGACCTTTTGCTTGGAAGAACTTGCAAAGATTCTGGAGTGCTTCAAGGAGGAAGGGCGGCTGATATATCCAATTTTTTATTATGTGGATCCATCGGAGCTTCGACGTCCAAGAGGAAGCTATGCAAAAGCATTGGCGAGACTAGAGAGACGATTCAAAGACAATCACGAGAAGGTGAAAAAATGGAGATTGGCTTTGTTCCAAGCTGCTAACTTGAAAGGCTTTCATCTAAAACCCAAGATTGCGGAAGAAAAAGATTATGTTACAAGGATCACTAGTGAAGTCTCTACTAGAATTAGCCGTATTCCTTTACATGTCACTGATTATCCAGTTGGACTTGCATCTCGAGTAAAGGAAGTAACTTCACTTTTAGATCTTTGGTCAAATGAGAAAATTAAAATGGTAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACTATTGCAAGGGCAGTGTATAATTCAGTTGCTGATTATTTTGAAGGCTTATGTTTCCTTTCTAATATAAGAGAGAAGTCTAAATCGTCAAATGGTTTGTCACATCTTCAGGAGATATTACTCAAGGAATTGGTCATGGAAAAAGATCTCAAATTGGGTGACATGAATAAAGGAATACCAATAATAGCACATAGGCTCTATCAGAAGAAGATTCTCTTGATTCTTGATGACATTAGCAAATCGAAACAGTTACAAGCACTAGCTGGAAGATGTGATTGGTTTGGTTCCGGAAGTAGAATCATAATCACCACAAGGAATAAACAATTGTTAGTAAGCCATGAAGTCAAAAGCATCTATCATGTCAGGGAATTAGATGATGAGGAATCTCTTCAATTGCTTAATTGGTATGCCTTTAAAAAGGAAAATGTGGAGATCGACTATATAGAGGTTTCCAATCGAGCAGTACTTTACTCATGTGGCTTTCCCTTAGCTTTAGAAGTGATTGGTTCTAATTTATGTGGTAAGAATGTCAACGAATGGAATTTTGCATTGGATCAATTTGAAAGAATACCACATGGAAGTGTTTTGGAGGTCCTTAAATTAAGCTATGATGCTTTAGAGGAAGAAGAGAAGAAAGTTTTCCTTGACTTGGCTTGTTTCTTCAATGGTGAGAAATTAAGAGATATCAGGGATATATTGCTATGTTCTCGTGGAATCCAACCAAAATATGCTATTGGAGTTTTGATTGATAAATCCCTCATAAAGATTGAAGGAGATCATGTAACAATGCACGACTTGATAGAAGACATGGGTAAAGAGATTGTTCGACAAGAATCACCTAATGAACCTGGCAGGCGCAGTAGGTTATGGTTCTATCAAGATATTTTTCATGTCTTACAACAAAATACCAATGTTGAAGCCATAATTCTAGACTCACCCAAAGGTAAAGAAGTACAATGGAGTGGAAAAGCATTCATGAAGAAGAAAAACCTCAGAATTCTTATGATGAAAAATGCATTCTTTTCTCGAGGTGCCAAATATCTCCCAAATAGTTTAAGGGTGTTACAATGGAAGGATTATCACTTCAAAATTTTACCATATAACTTTTGTCCAACAGAAACTTGTCTATCTTGA 1821 0.3756 MAQQARSCSLTYKWTYDVFLSFHGADTRLGFIGYLREALRQRGIHVFIDDEGIRTGEEIKPALFKAIRESRIAIVVFSENFANSTFCLEELAKILECFKEEGRLIYPIFYYVDPSELRRPRGSYAKALARLERRFKDNHEKVKKWRLALFQAANLKGFHLKPKIAEEKDYVTRITSEVSTRISRIPLHVTDYPVGLASRVKEVTSLLDLWSNEKIKMVGIWGAGGIGKSTIARAVYNSVADYFEGLCFLSNIREKSKSSNGLSHLQEILLKELVMEKDLKLGDMNKGIPIIAHRLYQKKILLILDDISKSKQLQALAGRCDWFGSGSRIIITTRNKQLLVSHEVKSIYHVRELDDEESLQLLNWYAFKKENVEIDYIEVSNRAVLYSCGFPLALEVIGSNLCGKNVNEWNFALDQFERIPHGSVLEVLKLSYDALEEEEKKVFLDLACFFNGEKLRDIRDILLCSRGIQPKYAIGVLIDKSLIKIEGDHVTMHDLIEDMGKEIVRQESPNEPGRRSRLWFYQDIFHVLQQNTNVEAIILDSPKGKEVQWSGKAFMKKKNLRILMMKNAFFSRGAKYLPNSLRVLQWKDYHFKILPYNFCPTETCLS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1587g0004 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Prci1587g0004 606 Pfam NB-ARC domain 203 432 IPR002182 GO:0043531
Prci1587g0004 606 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Prci1587g0004 606 Gene3D - 352 436 IPR042197 -
Prci1587g0004 606 PRINTS Disease resistance protein signature 387 401 - -
Prci1587g0004 606 PRINTS Disease resistance protein signature 294 308 - -
Prci1587g0004 606 PRINTS Disease resistance protein signature 217 232 - -
Prci1587g0004 606 Gene3D - 178 347 IPR027417 -
Prci1587g0004 606 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 602 IPR044974 GO:0006952
Prci1587g0004 606 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Prci1587g0004 606 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Prci1587g0004 606 Gene3D - 12 177 IPR035897 -
Prci1587g0004 606 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Prci1587g0004 606 Pfam TIR domain 16 179 IPR000157 GO:0007165
Prci1587g0004 606 SMART till_3 15 155 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1587g0004 16 600 WRKY Transcription Factor Family AT4G12020 30.449 6.30e-61 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1587g0004 - - pcin:129310467 1189.87