Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci157g0004 ATGGGAAGAACACCCTGCTGTGACAAGAGGGGTTTGAAGAAAGGGCCCTGGACGACTGAAGAGGATGAGATTCTCGTCGATTACATCAACAAGAATGGCGGCCATGGAAGCTGGCGTTCTCTCCCTAAGCTGGCAGGTCTGCTTCGCTGTGGGAAGAGTTGCAGGCTAAGGTGGACGAACTATCTGAGGCCTGATATAAAACGTGGTCCCTTCAGTGTTGAGGAAGAGAAGCTTGTGATACAGCTTCATGGCATCCTCGGCAACAGGTGGGCGGCGATAGCGTCACAGCTACCAGGAAGAACAGACAATGAGATAAAGAACCTGTGGAACACCCACTTGAAGAAGCGACTCTTGTGCATGGGACTCGACCCTCAAACCCACAAGCCTCTCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCAGCTGCCGCTTCTGCCGCTTCTACTCCCTCCAATGCCTCCATCTCCACCCGCCACATGGCTCAGTGGGAGAGTGCCAGGCTCGAGGCCGAGGCTCGCCTCTCCAAAGAGACCTCTCTCTTCGCCTCTCACTCCTCTGCCGCCGACCCCGACTTCTTCCTCCGCTTGTGGAACTCCGAAGTCGGCGACGCCTTCCGCAACATAAATGTCGTCTCTTCTCCGGGATCCTCCTCTTCCACCAAGTGCACTGTTGCTACTGCTCCAACAACACGTGCTTTCATGGCTTCGTCTGACGACTCTTCCATCTCTAATGATTTGGAAGAGTCGTCAGACACTGCGTTGCAGCTCTTGTTGGATTTTCCCATTTACAATGACATGAGCTTCTTAGAAGCAAACTCTTTCATTTCTCCTCTTTAG 837 0.5341 MGRTPCCDKRGLKKGPWTTEEDEILVDYINKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFSVEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCMGLDPQTHKPLSSSSSSSSSSSAAASAASTPSNASISTRHMAQWESARLEAEARLSKETSLFASHSSAADPDFFLRLWNSEVGDAFRNINVVSSPGSSSSTKCTVATAPTTRAFMASSDDSSISNDLEESSDTALQLLLDFPIYNDMSFLEANSFISPL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci157g0004 278 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Prci157g0004 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci157g0004 278 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Prci157g0004 278 SMART sant 13 64 IPR001005 -
Prci157g0004 278 SMART sant 67 115 IPR001005 -
Prci157g0004 278 Gene3D - 11 68 - -
Prci157g0004 278 Gene3D - 70 117 - -
Prci157g0004 278 FunFam MYB transcription factor 70 117 - -
Prci157g0004 278 FunFam Myb transcription factor 11 68 - -
Prci157g0004 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Prci157g0004 278 CDD SANT 16 62 IPR001005 -
Prci157g0004 278 MobiDBLite consensus disorder prediction 128 159 - -
Prci157g0004 278 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Prci157g0004 278 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Prci157g0004 278 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci157g0004 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Prci157g0004 278 CDD SANT 70 113 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci157g0004 1 272 MYB Transcription Factor Family AT3G61250 63.946 2.85e-123 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci157g0004 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci157g0004 K09422 - mnt:21400317 377.867