Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1576g0002 ATGCCGCTTTTCCTCATCACACAATTTGTCTACGTCATTTCCCTCTTCACCTTTCAATTTGATCGACTCAATGAACGCTCACGCGATTTTAACATTGTGGTTTGCCATGTTTTTGGAACTCTGGCCTGCCAGCTGCTCCTCGTCTCTCCAGTCAAGTGGTTCCTCGTCAACGCGTCTTCGCTGGTACTGGTCGTGGCTACATTCTTGTGTTACAGTTATCTCTTGCGTCTCCTCAACAATGCTTCCCAAACACAAAGGTTGGAGATTGATCGCAATGGAGATGGACAGGCTACTGAGATGGTGGATGTGGAAGTTGAAAAAGCAGTTGGATTCAAAAGGAAGAGAAACAATAACAGGATTGAAGAGAAGCAGAAAGAAGTAATCCATGTCAGGGCAAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAACGGGTGAGAAGAGAGAAGATCAATGAAAAGCTAAGATGCTTGCAGGACTTGGTTCCAGGATGTTACAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATCATAAACTACGTTCTGTCACTACAGCAACAGATTGAGTTTCTCTCCATAAAGCTCTCAGCGGCAAGCATGTGTTTTGATTTCAACACCTACGAGATGAATACCATCCAAACCATGCAGAGAAGTCCTAGCACAGATGGAATCCAAGGGATGGAAATGATGGAAGGAGAAGGTTATGGAGGCTTTGCTTATTGGAACCCTACATGGCCACTTCAGTAA 753 0.4436 MPLFLITQFVYVISLFTFQFDRLNERSRDFNIVVCHVFGTLACQLLLVSPVKWFLVNASSLVLVVATFLCYSYLLRLLNNASQTQRLEIDRNGDGQATEMVDVEVEKAVGFKRKRNNNRIEEKQKEVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKAMGMAVMLDVIINYVLSLQQQIEFLSIKLSAASMCFDFNTYEMNTIQTMQRSPSTDGIQGMEMMEGEGYGGFAYWNPTWPLQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1576g0002 250 CDD bHLH_AtBPE_like 126 207 - -
Prci1576g0002 250 Gene3D - 136 197 IPR036638 GO:0046983
Prci1576g0002 250 Pfam Helix-loop-helix DNA-binding domain 140 164 IPR011598 GO:0046983
Prci1576g0002 250 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 107 213 IPR024097 GO:0006355
Prci1576g0002 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 204 IPR036638 GO:0046983
Prci1576g0002 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 186 IPR011598 GO:0046983
Prci1576g0002 250 SMART finulus 142 192 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1576g0002 122 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 76.289 6.96e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci1576g0002 HLH 8.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1576g0002 - - pcin:129300423 487.648