LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1568g0001	ATGCGAGAACTCATTAATCAAGGAAGAGACCGAGGATCGTTCAGTCGTTATGACAGTGGTCATCGTTTGCATCTGGTAGCGGTGGCCATCGGGAACAGGAGACTTTCTGCAACTGAAGCTCTTCTCAAATGGAAACAAAGTCTCCCAAACCAACCAATCTTGGATTCATGGGTCTCTCCATCACCTCACAGCAGCATCAGTGCAGATCAATCCCCATGTTCATGGCATGGAATCAAGTGTGATTATTCTGGAAGTGTGGTTGAACTTGACTTGAGTCACACTGGTCTTCAAGGTACTCTTGAAAACTTGGACTTCTCAGCCTTTCCAAATCTTCTCCTTTTTAATCTCAAATTCAATCAACTGACTGGTCCCATACCAGAAACCATTGGGTTGCTCTCAAAACTCCAATTCCTTGATCTTAATCGTAATCATCTCAATGGCACTATACCTCTTTCTCTTGCTAATCTTACTCAACTCTATGAGCTTGACCTTTCATGGAATGAACTAACTGGGATATTAGATCCTCGTCTATTCCCTGATGGAACTGATGATCAACCCAAAATTGGATTGATAGTGATGAAATATCTTTTGCTCCAAGACAACTACCTTGGTGGAAAAATTCCAAATGAAATAGGGAATTTGAAGCACTTGACTATCCTATATCTGGATGCTAATATCTTTTATGGACCTGTTCCTCATTCTTTGGGGAACTGTACAAATCTAACTTCTCTCACATTGTCTGAAAACAAATTTTCAGGCATAATTCCCTCAAGTCTAGGTAGACTAACCAATCTAACTGTGATGCGTTTCCAAGAGAACCATTTTTATGGCCCTTTACCAGAAGGATTTGGAAACATTTCTTTTACTATCATGCTTCTATCTCAAAACAATTTCAGTGGCCAGTTACCATCACAAATATGCAGAGGTGGTAAGCTTGTCAATTTCACTGCAGCTAACAATAGTTTCTCTGGTCCAATTCCCATTAGCCTAAGAAACTGCCCTTCATTGCATAGACTTCGGCTTGAACATAACCAATTGACTGGTTATGTAGATAAGGATTTTGGAGTGTATCCTATTCTTACATTGACATCAGTTTCAATAAGGTGCAAGATAGGGGATCTTTACAGGTTGTTCAATTTGAATTTGAGCAACAATAACTTCTCTGGCAAAGTTCCATACCAAATTGGAAATCTTGAGTTCTTGCAAGAATTTTTGGACTTGAGCTATAATTCACTTTCTGGAGAAATCCCCGTGGATCTTAGCAAACTCAACAGATTGATAAGCTTGAACATGTCTCATAATAATTTTTCAGGTCCTGTCCTTGATTCCATAACAACAATGTTAAGCTTGTCAAGCCTCAATCTCTCTTACAACATGTTAGAAGGTCCTGTACAGGATAGTAGAATTTTCAGTTCTCCTTACATGGTTGATTTGAGTCACAACAAAAAATTATGTGGGAGGATCCAAGGTTTGAAACCTTATAATGTCTCAATTATAAAACCACAAGGTGGAGATGATAACAAAAAGAACATTGCGATCGCTATTTGCACTTCCTTGTTTGGTTCATTGGTTGTTTTGATGGGGACAGCTGGAATTTTCTTTATTCACTGTAAGAGAAACTCAAGAGCTCTAGGACACAACAGTGAAGTCAACAGAAGAAATATGTTCTCAATATGGAATTTTGATGGTAGAATCATGTATAAAGACATAATTGAAGCAACTAACAACTTTGATAAGAAATATTGCATTGGAGAGGGAGCTTTTGGGAAAGTTTACAAACTGATGTTGCCAGGAGAGGATAGAGTATTTGCTATCAAAAAGTTGACATGTGAAGAAGATAGCTTAGACATTGAGAGCATAAAAGCTTTTGAAAGTGAGATCAAAGCATTGATAGAGACTCGCCACCGGAACATTGTGAAGTTGCATGGATTCTGCTTGCAAAGATCACACATTTTTTATTTGCGAGTACATGGAAAGAGGAAACTTAGAGGCTATGCTTAA	2001	0.3843	MRELINQGRDRGSFSRYDSGHRLHLVAVAIGNRRLSATEALLKWKQSLPNQPILDSWVSPSPHSSISADQSPCSWHGIKCDYSGSVVELDLSHTGLQGTLENLDFSAFPNLLLFNLKFNQLTGPIPETIGLLSKLQFLDLNRNHLNGTIPLSLANLTQLYELDLSWNELTGILDPRLFPDGTDDQPKIGLIVMKYLLLQDNYLGGKIPNEIGNLKHLTILYLDANIFYGPVPHSLGNCTNLTSLTLSENKFSGIIPSSLGRLTNLTVMRFQENHFYGPLPEGFGNISFTIMLLSQNNFSGQLPSQICRGGKLVNFTAANNSFSGPIPISLRNCPSLHRLRLEHNQLTGYVDKDFGVYPILTLTSVSIRCKIGDLYRLFNLNLSNNNFSGKVPYQIGNLEFLQEFLDLSYNSLSGEIPVDLSKLNRLISLNMSHNNFSGPVLDSITTMLSLSSLNLSYNMLEGPVQDSRIFSSPYMVDLSHNKKLCGRIQGLKPYNVSIIKPQGGDDNKKNIAIAICTSLFGSLVVLMGTAGIFFIHCKRNSRALGHNSEVNRRNMFSIWNFDGRIMYKDIIEATNNFDKKYCIGEGAFGKVYKLMLPGEDRVFAIKKLTCEEDSLDIESIKAFESEIKALIETRHRNIVKLHGFCLQRSHIFYLRVHGKRKLRGYA	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1568g0001	666	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	369	493	-	-
	Prci1568g0001	666	Gene3D	Ribonuclease Inhibitor	118	182	IPR032675	-
	Prci1568g0001	666	FunFam	Nuclear pore complex protein NUP107	35	178	-	-
	Prci1568g0001	666	Pfam	Protein kinase domain	579	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1568g0001	666	Pfam	Leucine rich repeat N-terminal domain	37	81	IPR013210	-
	Prci1568g0001	666	SUPERFAMILY	L domain-like	65	480	-	-
	Prci1568g0001	666	Gene3D	Ribonuclease Inhibitor	32	117	IPR032675	-
	Prci1568g0001	666	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	186	368	-	-
	Prci1568g0001	666	Gene3D	Ribonuclease Inhibitor	183	493	IPR032675	-
	Prci1568g0001	666	FunFam	Leucine-rich repeat receptor protein kinase MSP1	540	655	-	-
	Prci1568g0001	666	PANTHER	OS04G0122200 PROTEIN	87	171	-	-
	Prci1568g0001	666	ProSiteProfiles	Protein kinase domain profile.	577	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1568g0001	666	ProSitePatterns	Protein kinases ATP-binding region signature.	583	607	IPR017441	GO:0005524
	Prci1568g0001	666	Gene3D	Phosphorylase Kinase; domain 1	539	654	-	-
	Prci1568g0001	666	SUPERFAMILY	Protein kinase-like (PK-like)	551	652	IPR011009	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1568g0001	114	660	Receptor kinase-like Gene Family	AT4G08850	36.473	6.68e-95	313

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Prci1568g0001		Pkinase	7e-10	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1568g0001	-		-	pcin:129300406	1290.02