Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1567g0001 ATGGCGGATTTGGAAAAAGATGAGGTGCCAATGCTGTCAGAGACGGAGCAACCATCAGTTGAATTTGTGGATTCTAAATTGCGGAGGCTTGTATCCAGGACACGAAGTGCATCAATATCTATTCCCACGAGCTCCATGGAGCCATATGAGAGAGAAACTAGTCTTGTGGGACATACTGGTCCGCTAAGGAGTGAGAGGAAAACTCCCTTTGTGCAGATGAGCGGTCCACTATATGTCACCAACAGACATGGAAATCTTTTCCGACAGAACGTCAATGCCACAGGGAACAAAGCAGTGGAGAGCATGACAGAAAAATTTGCTTTGCCTGGAAGAAATGGTAATGATTGGCAGAACAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGCAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTCTCAGCAAAGGAATCATAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTTTTTCTTCCCTGTCTTCATGTGTCCCTGGAGTTATGAATCCTCATGCTAAAGTTGTACAGCATTGGAACAAGTTTTTTGCCATATCTTGCCTATTGGCAATTTTTGTGGATCCATTGTTTTTCTTCTTACTCGGTGTAAAACAGGATGACAGATGTATCTTCATCAACTGGAAGTTGACACGGGCACTTGTTTGCTTAAGATCCATAAATGATTTTGTATACTTCCTAAACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCCAGGGTGGTTGGTGCTGGCGATTTAGTTGACCATCCAACAAAAATTGCTCTCCATTATTTGCATAGTTGTTTTTTTGTTGACTTATTTGTTGTGTTTCCACTTCCTCAGATAATGATATTGCTTGTTCTACCAAATCACTTGGGTTCATCAGGAGCTAATTATGCTAAGAATCTTCTACGTGTAGCAGTCCTTGTTCAGTATATTCCCAGATTGTACAGGTTTCTTCCTCTTCTAATTGGTCAGTCTCCAAGTGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATGTCGTTGGGTCTTCCTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGCCATCGGGAGAAATTTGCACACTGCACGCAATTGATTGATTGTGGACATGGTCATACAGAAAACAATCGGTCTTTTCTTTTGGTCAATGGAATCAATCAATTCAATCAAACTTGGTTACAAAGTCCTGGTGCAGGCCAATGTTTCAATGTCTCGGATGCTGGTTTTCCTTATGGGATCTATGCTAAAGCTGTTAACCTTGTTACAGAACATAGTGTGGTCACAAGATATGTGTATTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGGAATCAAAACCCAAGCTATTTTGTTTGGGAAGTCCTTTTTACAATGGGCATCATTGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGATCGAAGGAGGCTAGAAATGTCACTTAGACGTCGTGATGTGGAACAATGGATGAGCCACCGGCGCTTGCCAGAAGATTTAAGAAGGAGAGTAATACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGGGTAAATGAAGAAATGCTTCTGGAGAGTTTGCCAGAGGATCTTCAGAGAGACATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAGACAGAAAACATACATCAAAGGAAGCAATATTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGACCAGTGTTCCCCTAGCTGAAGGGGATGTGTGCGGTGAAGAGCTCCTGAGATGGTGTCTGGAACATTCTTCGGTGAACAGAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCAGCAGGACTGTACGTTCCTTGACAAATGTGGAGGCATTTTCACTACGGTACGCAGACCTTGAAGAGGTCACTAGCCTTTTTACCAGGTTCTTGAGAAATGCGCGTGTTCAAGGAGCCATAAGGTATGAATCACCTTATTGGAGGAGCCTTGCTGCAACTCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTGAGTCGTGCTGATCCCTCCCAGCCAAATCCGTAA 2331 0.4277 MADLEKDEVPMLSETEQPSVEFVDSKLRRLVSRTRSASISIPTSSMEPYERETSLVGHTGPLRSERKTPFVQMSGPLYVTNRHGNLFRQNVNATGNKAVESMTEKFALPGRNGNDWQNNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNHKASGLFDPKFHNALYGDAKGCARRFFSSLSSCVPGVMNPHAKVVQHWNKFFAISCLLAIFVDPLFFFLLGVKQDDRCIFINWKLTRALVCLRSINDFVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPTKIALHYLHSCFFVDLFVVFPLPQIMILLVLPNHLGSSGANYAKNLLRVAVLVQYIPRLYRFLPLLIGQSPSGFIFESAWANFFINLLTFVLSGHVVGSSWYLFGLQRVNQCLRNACHREKFAHCTQLIDCGHGHTENNRSFLLVNGINQFNQTWLQSPGAGQCFNVSDAGFPYGIYAKAVNLVTEHSVVTRYVYSLFWGFQQISTLAGNQNPSYFVWEVLFTMGIIGLGLLLFALLIGNIQNFLQALDRRRLEMSLRRRDVEQWMSHRRLPEDLRRRVILAERYNWAATRGVNEEMLLESLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSNILYHGGLVDKMVFVVRGRLESIGDDGTSVPLAEGDVCGEELLRWCLEHSSVNRDGKKVRLPGQRLLSSRTVRSLTNVEAFSLRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADPSQPNP 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1567g0001 776 ProSiteProfiles cAMP/cGMP binding motif profile. 607 675 IPR000595 -
Prci1567g0001 776 Gene3D Helix hairpin bin 533 599 - -
Prci1567g0001 776 Pfam Ion transport protein 205 535 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci1567g0001 776 SUPERFAMILY cAMP-binding domain-like 535 731 IPR018490 -
Prci1567g0001 776 Gene3D - 202 532 - -
Prci1567g0001 776 CDD CAP_ED 607 723 IPR000595 -
Prci1567g0001 776 Gene3D Jelly Rolls 605 729 IPR014710 -
Prci1567g0001 776 SUPERFAMILY Voltage-gated potassium channels 198 536 - -
Prci1567g0001 776 SMART cnmp_10 607 739 IPR000595 -
Prci1567g0001 776 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 768 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1567g0001 5 685 Ion Channels AT3G17700 63.333 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1567g0001 K05391 - tcc:18587138 1125.92