LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1560g0001	ATGGCGTTCAACATAACCTCCATCAAAACGTCGTCGAATGGAGCCTGGCAAGGCGATAACCCCTTGGACTACGCATTCCCACTTCTCATCATCCAAACTACCTTAATCCTCCTAGTCAGCCGCTCCCTCGCCTTCCTCCTCAAGCCCCTTCGCCAGCCCAAAGTCATCGCCGAGATTGTCGGAGGAATCGTACTAGGCCCCTCGGCTTTTGGAAGGAACAAAACATACATGCACCGTGTATTCCCTTCATGGAGCACTCCCATTCTTGAATCCGTCGCCAGCATAGGCCTTCTCTTCTTCCTCTTTCTCGTAGGGCTCGAATTGGACTTGAATTCCATCCGCCGCAGTGGTAGGAGAGCTTTTACTATTGCAGCCGCCGGAATTTCCCTTCCTTTTGTTTGCGGCTTCGGCGTCGCCGTCGTTCTCCGCAAAACCATCGACGGAGCCGATAAGGTTGGTTTCGCCCAATTTCTCGTCTTCATGGGAGTCGCGCTTTCCATCACCGCATTCCCCGTGCTCGCCCGTATCCTAGCAGAGCTCAAGCTCCTAACCACCCGTGTCGGAGAGACTGCTATGGCCGCCGCAGCATTTAACGACGTCGCCGCGTGGATCTCTGCTCTCGCCGTCGCTCTCGCGGGGGACGCCGGAAACCAGAAGAGCCCTTTGGTATCGGTCTGGGTGTTGCTATCGGGCCTTGGTTTTGTGATCTTCATGACGGTCGTGATCCGACCTGTGATGAAACGGGTGGCCCGGAGGTGCTCGTCGGAGCATGATGCCGTGGACGAAGCTTATATTTGCTTGACTCTGGCAGGAGTGATGATCTCGGGGTTCATGACGGACCTCATTGGGATCCATTCGATATTCGGGGCCTTCGTGTTCGGGTTAACCATTCCAAAAGGCGGTGATTTTGCGGACAGATTGATAGAGAGGATCGAGGATTTCATTTCTGGTTTGCTTCTTCCGCTTTATTTTGCTTCGAGTGGGTTGAAGACTGACGTGGCGAAAATCAGAGGTGCGGAAGCATGGGGGCTTCTGGTGCTGGTGATATCGACGGCGTGCACTGGCAAGATACTGGGAACGTTCGCGGTGGCGTTACTGTGTAGGATGCCGGCGAGAGAGGCTCTGACTTTGGGTTTGCTCATGAACACCAAAGGACTGGTGGAGCTCATCGTACTCAACATTGGAAAAGAAAAAAAGGTTCTGAACGACGAGATGTTCGCCATCCTCGTCCTGATGGCTCTGTTCACCACCTTCATCACAACCCCAACAGTGATGGTCATCTACAAACCCGCTCGCGATATCTCCTCCCGCACCCACCGCAAGCTCGGCGACCTCACCTCTAACTCCAAGAACGACGTCTCAGACGAACTCCGTGTCCTCGCCTGCGTCCACGGTCCCGGCAACGTCCCTTCCATTATCAGCCTCATCGAGTCCACTCGCAGCACCAAGAACTCCTCCCTCAAGCTCTTCATCATGCACCTCGTGGAGCTCACCGAACGCTCTTCCTCCATCATCCTAGCTCAACGTGCTCGCAGGAATGGCTTCCCCTTCTTCAACCGCTACCACGGCGCCCACTGGCACGACCCGCTCTCTGGGGCTTTCCAGGCCTACAGCCAACTGGGCCGGGTCGCCGTCCGGCCCACGACCGCGATCTCCTCTCTGACCACCATGCACGAGGACGTATGCCACGTGGCGGAGGAAAAGAGGGTCACCATGATTATCCTGCCCTTCCACAAACAGTGGAGGAGGATGGAGCGGGAGAATGAGGACAAAGGAAGTCACGAGATCATGGAGAATGTGGGCCATGCGTGGAGAGTTGTCAACCAGAGAGTGATGAGGAACGCGCCTTGCTCCGTGGCGGTGCTGGTGGACCGTGGATTTGGGGACGGGTACCAAACTCCAGGCCCAAATGTTACTGTGGCCCAAAATGTTTGCGTCCTGTTCTTTGGCGGGCCCGATGATCGCGAGGCCCTGCAATTGGGCTCAAGAATGGCCGAACATCCCGTGGTTAAGGTGACGGTGGTGAGGTTCGTTGAGGCCGAGAGGGATGCCTCAAGAAGCACCGAACTCGTGGTCCGCCACTCCCCGAGGCCGAGGAACATCAGCGACAATATCTACAGCTTCTCCACCGCCAAAATGGACCGCCAGACGGAGCAGGAGATGGATGAGGCGGCTGTGGCAGAGTTCAGGAGCAAGTGGGAGGGAGTGGCGGTGTATATGGAGAAGGTGGGGAGAAACATAGTGGAGGAAGTGATGGCAATAGGGAGAGGCGGTGGTTACGATCTGATAGTAGTGGGGAAGGGGAGGTTTCCGTCTAGGATGGTGGCGGGGCTGGCGGAGAGGCAGGCGGAGCACGCAGAGTTGGGGCCGATAGGGGACATTCTGTCGTCGTCAGAGAACGGAGTGGAGGCATCGGTGCTGGTGGTTCAGCAACATGACGTGGCGCTCGCGGAGGAGGCCCCCGTGTCCAAGGGACACGCTGGCAAGTCCGACAACCAGGAGTCTTCCGGTGCCAGTACTGCCACGGAATCCTCAGTGGCAAGCCACAATATAGTGTAA	2559	0.5666	MAFNITSIKTSSNGAWQGDNPLDYAFPLLIIQTTLILLVSRSLAFLLKPLRQPKVIAEIVGGIVLGPSAFGRNKTYMHRVFPSWSTPILESVASIGLLFFLFLVGLELDLNSIRRSGRRAFTIAAAGISLPFVCGFGVAVVLRKTIDGADKVGFAQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILXALAVALAGDAGNQKSPLVSVWVLLSGLGFVIFMTVVIRPVMKRVARRCSSEHDAVDEAYICLTLAGVMISGFMTDLIGIHSIFGAFVFGLTIPKGGDFADRLIERIEDFISGLLLPLYFASSGLKTDVAKIRGAEAWGLLVLVISTACTGKILGTFAVALLCRMPAREALTLGLLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPTVMVIYKPARDISSRTHRKLGDLTSNSKNDVSDELRVLACVHGPGNVPSIISLIESTRSTKNSSLKLFIMHLVELTERSSSIILAQRARRNGFPFFNRYHGAHWHDPLSGAFQAYSQLGRVAVRPTTAISSLTTMHEDVCHVAEEKRVTMIILPFHKQWRRMERENEDKGSHEIMENVGHAWRVVNQRVMRNAPCSVAVLVDRGFGDGYQTPGPNVTVAQNVCVLFFGGPDDREALQLGSRMAEHPVVKVTVVRFVEAERDASRSTELVVRHSPRPRNISDNIYSFSTAKMDRQTEQEMDEAAVAEFRSKWEGVAVYMEKVGRNIVEEVMAIGRGGGYDLIVVGKGRFPSRMVAGLAERQAEHAELGPIGDILSSSENGVEASVLVVQQHDVALAEEAPVSKGHAGKSDNQESSGASTATESSVASHNIV	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1560g0001	853	PANTHER	CATION/H + ANTIPORTER	9	814	-	-
	Prci1560g0001	853	Gene3D	-	538	789	-	-
	Prci1560g0001	853	MobiDBLite	consensus disorder prediction	829	853	-	-
	Prci1560g0001	853	MobiDBLite	consensus disorder prediction	819	853	-	-
	Prci1560g0001	853	Pfam	Sodium/hydrogen exchanger family	36	425	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Prci1560g0001	853	Gene3D	-	28	436	IPR038770	-
	Prci1560g0001	853	FunFam	Cation/H(+) antiporter 15	28	436	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1560g0001	76	825	Antiporter Super Family	AT3G53720	67.628	0.0	939

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1560g0001	K26731		-	jre:108999019	1203.73