LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1547g0002	ATGGGTTGCGTGCTCGGAGTGGCAAGGGACGATGCAGGCCGCAGGGCGGGCTCCGGAGCTCGGAACCGTCGTGAGCAAAACTGTGCTGCTGACGGAGGTAATGCTGTTAGGGTTGGGAGCGAAGGGACAGCGAAGGAGAAGCAAAGGACTGGGCAGCACGGCGGCGAATTTGTTGATCAGTTCCCGGGACCGGAACGACGGAAACCTAGTCTTGATCCTTGCGCTCAAACCCAACAGGGGTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCAATTCGAGATTGGGCTCCTCGGCGCGCCAACACGTTCGAGAAACTCGCGAAGGTGAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCAAAGGTGTCTTGCATCGTGATATCAAGGGTTCCAATCTGCTTATTGATGATGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCAGCTTTCTATGATCCTGAGCACAAGCAGCCCATGACAAGTAGAGTTGTTACGCTTTGGTATCGTGCTCCTGAGCTTCTTCTTGGGGCTACATACTACGGTGTTGGTATTGACCTTTGGAGTGCTGGCTGCATCTTGGGAGAGTTGCTTAATGGGAAGCCAATCATGCCTGGTCGAACAGAGGTTGAACAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCTGAAGATTACTGGAAGAAATTTAAATTGCCAAATGCTACGCTCTTCAGGCCACAGCAGCCATATAAACGATGCATTTTGGAAACCTTCAAGGATTTCCCTCCTTCTTCCGTACATCTAATATCTACTCTTCTTTCAATAGATCCTGATGATCGTGGCCGTGCCTTGGCTGCTCTAAATAGTGATTTTTTTACCACCGAGCCCTATGCTTGTGAACCATCAAGTTTGCCAAAGTATCCTCCCAGCAAAGAATTGGATATAAAACTGAGAGATGAAGAAGCTAGAAGACAAAAAGCTCTAAATGGGAAACATAATGCTATTGATGGTGCCAAAAGAGTCAGAGTACGTGATCGTGGTCGGGCAATTCCAGCCCCAGAAGCCAATGCAGAGATCCAATCAAACTTAGATAGGTGGAGAGTGGTGACACATGCAAACGCAAAAAGCAAGAGTGAGAAATTCCCACCACCTCATCAAGATGGGGCCGTTGGATATCCATTGGGTGCATCTCACAAGGGACCTGTCTCATTTGGTGCCACTGAAACGGATGCTTCCTTTAGCTCCGCAATATTTAATTCAAAACCTGCAGGACCTTGCAGGGGTAAGAAGACAAAGAAAACAGATTCATCATGGAAACTCATGCGTCCATTCAAATAA	1341	0.4773	MGCVLGVARDDAGRRAGSGARNRREQNCAADGGNAVRVGSEGTAKEKQRTGQHGGEFVDQFPGPERRKPSLDPCAQTQQGWPSWLMAVAGDAIRDWAPRRANTFEKLAKVKCYMKQLLSGLEHCHSKGVLHRDIKGSNLLIDDEGILKIADFGLAAFYDPEHKQPMTSRVVTLWYRAPELLLGATYYGVGIDLWSAGCILGELLNGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKFKLPNATLFRPQQPYKRCILETFKDFPPSSVHLISTLLSIDPDDRGRALAALNSDFFTTEPYACEPSSLPKYPPSKELDIKLRDEEARRQKALNGKHNAIDGAKRVRVRDRGRAIPAPEANAEIQSNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLGASHKGPVSFGATETDASFSSAIFNSKPAGPCRGKKTKKTDSSWKLMRPFK	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1547g0002	446	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	129	141	IPR008271	GO:0004672\|GO:0006468
	Prci1547g0002	446	MobiDBLite	consensus disorder prediction	375	407	-	-
	Prci1547g0002	446	Gene3D	Transferase(Phosphotransferase) domain 1	101	333	-	-
	Prci1547g0002	446	FunFam	probable serine/threonine-protein kinase At1g54610	97	333	-	-
	Prci1547g0002	446	ProSiteProfiles	Protein kinase domain profile.	1	293	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1547g0002	446	MobiDBLite	consensus disorder prediction	1	76	-	-
	Prci1547g0002	446	PANTHER	CELL DIVISION PROTEIN KINASE	104	297	-	-
	Prci1547g0002	446	SMART	serkin_6	10	293	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1547g0002	446	Pfam	Protein kinase domain	107	293	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1547g0002	446	SUPERFAMILY	Protein kinase-like (PK-like)	106	298	IPR011009	-
	Prci1547g0002	446	MobiDBLite	consensus disorder prediction	419	446	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1547g0002	107	327	Core Cell Cycle Gene Families	AT5G10270	52.252	1.62e-75	243

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Prci1547g0002		Pkinase	1.2e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1547g0002	K08819		-	gmx:100807756	587.03