LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1531g0004	ATGTGCAAGTCCAAAAGCAGCACAAACGTGACCGAACCCATGCCCCGTCGATCTCGCACCTTCCAGTCATCTTCTTCTTCGCCTCATACCACCGCCAATAATCTCCGTCCCAATTCTTCTTCCTTTCAGCTCACCACAGAATCCACTAGCTACTACTACAAGGACTGGTCTAAAGGCTCCTCCGTTTCCACCGCTTCCTCTCTCTCTAGCCTTAAGGACTCTTTGCCTGATAACCCCCATATCTACGAGTTCTCCGAGATTTCCTCCGCCACTGGGAATTTCCTTTCCCAAAAACACTCCTCTTCATCTTCTTCTTCGTCCTGGAGATGCTCCATTCGCAACAAGGATGTTCTGGTTTTCCAGCGCAAGTTTCGCCGTCCCATGGACATGCCGGAGCTCCGAGATCGGCTTGCTGTCATTTGCCGGAGCCACCATAGTAGCTTGATCAAACTTCTCGGGGCATCGGTCTCCGGTAATTCCATTTATCTTGTGTATGACTATGTTCAGGGTGTGAATCTCGCTGATTGTCTTCGAAATCGTTTGAATCCCAGCTTCACTGATCTCTCTACGTGGCTTTCTCGGATGCAAATCGCCACTGATCTTGCCCACGGGCTAGATTACATCCACCATTTCTCCGGACTCAATTCGAATTTCGTGCACAACCATATCAAAAGTTCGAGCATCGTCATCACGGAGGATACTCTAAACGCGAGGATTTGTCATTTCGGAACCTCGGAATTGTGCGGTGAAATTGTCGCCGCCGAAACACCTTCCAGTTCCAATTCCTCGAAATTGAAGGAGCTGCAGAGATCCGGTAGCCGGACGGTGAGACTGGAAGGGACGAGAGGGTATATGGCGCCGGAATATCTGGCAACGGGGATCGCGACGCAGAAATCGGATGTGTACGCTTTTGGGGTCGTGGTTTTGGAGCTCCTCAGTGGGCAAGAGGCGTTGAAGTACGAATTCGATGACGACGGTGGGTATAGAAGGATGAGTGTGGTGGAGACGGCGAGGTTAGCTATGGCGGAAGAAGGTGGCGCGAGGAAATGGGTGGACAAGCGGCTGAAGGATTCGTTTCTGGTGGAAGCAGCAGCAGAGATGATTCGGGTCGGGTTAGATTGCGTGGAAGAAGATCCGAGTGAGAGGCCGGATATGGGTCGGGTTGCAGTATTGATATCGAAACTGTACTTGGATTCGAAGAGGTGGGCCGAGAGTATGGGAACGGCTATTGACCTGACTGTCTCATTAGCACCTCGGTGA	1260	0.5135	MCKSKSSTNVTEPMPRRSRTFQSSSSSPHTTANNLRPNSSSFQLTTESTSYYYKDWSKGSSVSTASSLSSLKDSLPDNPHIYEFSEISSATGNFLSQKHSSSSSSSSWRCSIRNKDVLVFQRKFRRPMDMPELRDRLAVICRSHHSSLIKLLGASVSGNSIYLVYDYVQGVNLADCLRNRLNPSFTDLSTWLSRMQIATDLAHGLDYIHHFSGLNSNFVHNHIKSSSIVITEDTLNARICHFGTSELCGEIVAAETPSSSNSSKLKELQRSGSRTVRLEGTRGYMAPEYLATGIATQKSDVYAFGVVVLELLSGQEALKYEFDDDGGYRRMSVVETARLAMAEEGGARKWVDKRLKDSFLVEAAAEMIRVGLDCVEEDPSERPDMGRVAVLISKLYLDSKRWAESMGTAIDLTVSLAPR	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1531g0004	419	Gene3D	Transferase(Phosphotransferase) domain 1	170	409	-	-
	Prci1531g0004	419	SUPERFAMILY	Protein kinase-like (PK-like)	123	396	IPR011009	-
	Prci1531g0004	419	ProSiteProfiles	Protein kinase domain profile.	93	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1531g0004	419	PANTHER	OS09G0572100 PROTEIN	1	419	-	-
	Prci1531g0004	419	Gene3D	Phosphorylase Kinase; domain 1	56	167	-	-
	Prci1531g0004	419	Pfam	Protein kinase domain	136	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1531g0004	419	MobiDBLite	consensus disorder prediction	1	41	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1531g0004	77	406	Receptor kinase-like Gene Family	AT1G51940	30.383	1.32e-39	148

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Prci1531g0004		Pkinase	4.8e-23	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1531g0004	-		-	qsa:O6P43_008679	566.229