Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci152g0001 ATGGTTTTTTCTTCCATGTATCCTTATCTTGATCCGGCCAACTGGCAACAACAGCAACCTGATCGTCAGATTGGAACTGGCGGTGGTCCGAGTTCTCAGCTTCTTCCTCCTCCGCCTCCGCTTCCTGCACAGTCTCATGGGGCCGGCGGTTCCGTCTCCATCAGGCCTGGTTCCATGGCTGACAGGGCTCGGATGGCCAACATACCGATGCCGGAGGCGGCGATGAAGTGCCCTCGGTGCGAATCCACCAACACCAAGTTTTGCTACTTCAACAACTATAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACATGTAGAAGGTACTGGACCCGAGGTGGGGCGTTGCGAAATGTGCCGGTCGGTGGGGGATGCCGAAGGAACAAGAGAAGCAAAAGCAGCGGCTCAAAGTCACCGCCGGCGAGCTCTGATCCCCAGACGGCCAGTGCTAGTTCAACCAATTCAGTATCTTCTAACAGTGCTTCTGCTGCTGATATAGTAGGCCTTTCGTCTCAGGTTCCGCCTCTGAGGTTCACGGCTCCTTTGCATCAACTAACTGAGTTTGGATCCGGAGATATGGGATTGAACTATGGTTTGAGTAATTACAGCGCAATTTCAGGTCCAGTGGGAGGAGTGGGTGACTTAAGTTTCCATATCGGAACCGCTTTTCCGGGAGGAGCAAGTAGCAGCAGCAGCTCGATCTTATCCGCCGCCGCCGGTTTAGAGCAGTGGCGGCTGCCACAAGCACAACAGTTTCCCTTCTTAGCTGGCTTGGGAGCCTCGCCTGAATTGTACCAATTTGAAAGTGGAGCTGCAGTGCCCAGATATGGTGGCGGCGCAAGTCATCAACCCCGGCCAAAGGTTTCAACTGGGGTGATAACTCAACTAGCTTCAGTGAAAATGGAAGACCATAATCACCGGGAACTAAATTTGTCAAGGCACTTCTTGGGGATAAATAATAATTCGACAGATCATGAGCAGTATTGGAATACTACAGCCGGTAATTCTAATACTGCCGCTCCTAATTGGACTGATCTTTCTGGGTTTAGCTCTTCTTCCACTACTAGCAACAATCCACCATAG 1080 0.5185 MVFSSMYPYLDPANWQQQQPDRQIGTGGGPSSQLLPPPPPLPAQSHGAGGSVSIRPGSMADRARMANIPMPEAAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKSSGSKSPPASSDPQTASASSTNSVSSNSASAADIVGLSSQVPPLRFTAPLHQLTEFGSGDMGLNYGLSNYSAISGPVGGVGDLSFHIGTAFPGGASSSSSSILSAAAGLEQWRLPQAQQFPFLAGLGASPELYQFESGAAVPRYGGGASHQPRPKVSTGVITQLASVKMEDHNHRELNLSRHFLGINNNSTDHEQYWNTTAGNSNTAAPNWTDLSGFSSSSTTSNNPP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci152g0001 359 MobiDBLite consensus disorder prediction 133 155 - -
Prci152g0001 359 MobiDBLite consensus disorder prediction 16 56 - -
Prci152g0001 359 Pfam Dof domain, zinc finger 74 129 IPR003851 GO:0003677|GO:0006355
Prci152g0001 359 MobiDBLite consensus disorder prediction 330 359 - -
Prci152g0001 359 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Prci152g0001 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 58 227 IPR045174 GO:0003700|GO:0006355
Prci152g0001 359 MobiDBLite consensus disorder prediction 16 30 - -
Prci152g0001 359 MobiDBLite consensus disorder prediction 119 155 - -
Prci152g0001 359 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci152g0001 48 354 C2C2-Dof Transcription Factor Family AT3G55370 43.478 1.42e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci152g0001 zf-Dof 2.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci152g0001 - - tcc:18597775 379.022