Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1527g0001 ATGGAGAAGGAGAAGAAAGTGAGTTTTGTGAGAAATGGCGAGCTCAGATTGCCACCTGGGTTTCGATTTCATCCAACAGACGAAGAACTTGTGGTTCAATACTTGAAGCGCAAGGTCTTGGCTTATCCTTTGCCAGCTTCAATCATTCCTGAGGTTCATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGTCATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAGTACTCTAATGGAAGCCGATCTAACAGAGCCACACTTTCTGGGTATTGGAAGGCCACGGGTTTAGACAAGCAAATTTTGACTTCGAAACCCAACAACCATCAAGTCGTCGTTGGCATGAAGAAGACTCTGGTTTTCTACAAAGGCAAGCCTCCTCATGGCTCCAGAACCGACTGGATCATGCACGAGTATCGCCTCCATAATACACAGAGCTCTGTGGTGGGTATGCAGAACTGGGTACTGTGTCGTATATTCTTGAAGAGAAGAAATGGAAAGATGAGTACTGAAGAACAGAGCAATTTCAGAGTGAATAGAGACATGATGAACAAGTTAAGCTCAAGGCCTGTGTTCTATGATTTCTTATCACAGAGCAATAAGAATAACAATAATAATAGTAAGACTGATTTGAATCGGACACCTACCTCGTCGACCTCAAGCATAAGTGGAATCACGCATCTCTCTGGTTCTCGTTCTCTTCACAACGAATCTGATGAGCGTGAAGAAGCAAGCAGTAGTTGCAACAGCTTACCGTCTCTTACAAGAAACCCGTGA 786 0.4415 MEKEKKVSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLAYPLPASIIPEVHVCKSDPWDLPGHMEQERYFFSTREAKYSNGSRSNRATLSGYWKATGLDKQILTSKPNNHQVVVGMKKTLVFYKGKPPHGSRTDWIMHEYRLHNTQSSVVGMQNWVLCRIFLKRRNGKMSTEEQSNFRVNRDMMNKLSSRPVFYDFLSQSNKNNNNNSKTDLNRTPTSSTSSISGITHLSGSRSLHNESDEREEASSSCNSLPSLTRNP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1527g0001 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 229 - -
Prci1527g0001 261 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Prci1527g0001 261 ProSiteProfiles NAC domain profile. 17 165 IPR003441 GO:0003677|GO:0006355
Prci1527g0001 261 MobiDBLite consensus disorder prediction 199 235 - -
Prci1527g0001 261 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Prci1527g0001 261 Gene3D NAC domain 26 170 IPR036093 GO:0003677|GO:0006355
Prci1527g0001 261 MobiDBLite consensus disorder prediction 199 261 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1527g0001 7 254 NAC Transcription Factor Family AT5G13180 56.015 6.34e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1527g0001 NAM 2.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1527g0001 - - tcc:18608896 321.242