Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1516g0004 ATGTCTCGCATTTTTTGTTTTAAATTTGATGATATATTGAACAATTTGTTTGTTATAGTTGTGCACATGTGTAGGATTAAGTCTAGCAAGGCAAAGATGAGTGTGGCGAGGGCAGGAAGCTCAGATGAGTGTACTGGGCATGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGATCCAACTTGTCGATACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAAGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATAGTAAAATTCTACAATTCCTGGATTGATAATAAGAACAAGACTGTTAACATCATCACGGAGTTGTTCTCTTCGGGTAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTTAAAGGATGGGCAAGACAGATATTAATGGGTTTAAACTACCTCCATGGTCACAACCCACCTATTATACACAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGAATTTATGGCACCCGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCGTATAGTGAATGCAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCCGCTTCCCTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGAATGTCAGCAAAGGAGCTTTTGATAGATCCTTTTCTTCAAATGAATAGTTTGGCAAGAAATCGTCGTCTATCCTTACCAGATATTGTCATCCCTAAATGTGGAGCCTTTGGAGATCGTATCCTCGTGTCAGAAGGTCCTGCTACTCAACATAACAGATCAAATTCCTTGGATCTTGATGATACTTGTGAATTACCTATGATCACTACATACGATGGTTCTGGTAACGCTTCACATTGTCAATGTGTTGAGGTACAAAAGTTGAAGAGAGGTGATATTTTCAATCTAAAAGGTGAAGAAAATGATGAGAATTCTGTGTCGATAGTTCTTCGGATAGCTGATCAAGGAGGGCGAGTAAGAAATATCCATTTCTTATTTTACCTAGATAGTGATACTGCTATTTCAGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTCCAGATCAAAATATAAAATTCATAGCTGAGTTGATAGATTTGTTATTGATTAATTTGGTTCCAAAGTGGAAACCTTGTGTAGATATTGCTCATTTGGTTTCACGAAGTTGTAGAAAAACTATTATTGGACAAAAAGATCTGGAGCTAGCAAAACAGAAGCAGCACTCAGAAGATTCTATACAAAATATTACTGAAGAGAAAGGTATCTCATGCTCGAATCGCAGCTCTCTTGCATCAGAAAAACATTATCACTCCAACTTGAATGAAATTTCATCCTATGGCAACATTGATCACGGAAATACAATCAAAATAGATGATTTGTGTTCTGAGACTAATGATAAGAAGTTATCTTTAGTTTCGTTCTTGTCTGTGGACTCAGCATTTAATGATTTCAACTTGCCAAGAGTGCCAGGAGAGACTGAATGCTCTTTTGTATCTGTAATGGAAGCATGGCCAAATTATCATAGGAGTAAGATATCAGAATTAGGAAGTCATGATATGTTAAGCTTCCCAGCCCATTCTAGTAATGTTTCTTCTTTATCTAACGTAGAAGATGAGTTGAAAATAGAGTTAGAAGTGATTGAACAGAAATATCTAGAGACAATTAAAGAAGCATCAAAAGTAAGATCTCAAGCTATCATGGAGGTTAGAGGAAGGTTACCCCAGAAGAAGATCCAATCATAA 2049 0.3773 MSRIFCFKFDDILNNLFVIVVHMCRIKSSKAKMSVARAGSSDECTGHAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYKAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDNKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPASQRMSAKELLIDPFLQMNSLARNRRLSLPDIVIPKCGAFGDRILVSEGPATQHNRSNSLDLDDTCELPMITTYDGSGNASHCQCVEVQKLKRGDIFNLKGEENDENSVSIVLRIADQGGRVRNIHFLFYLDSDTAISVSSEMVEQLELPDQNIKFIAELIDLLLINLVPKWKPCVDIAHLVSRSCRKTIIGQKDLELAKQKQHSEDSIQNITEEKGISCSNRSSLASEKHYHSNLNEISSYGNIDHGNTIKIDDLCSETNDKKLSLVSFLSVDSAFNDFNLPRVPGETECSFVSVMEAWPNYHRSKISELGSHDMLSFPAHSSNVSSLSNVEDELKIELEVIEQKYLETIKEASKVRSQAIMEVRGRLPQKKIQS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1516g0004 682 Gene3D Phosphorylase Kinase; domain 1 50 146 - -
Prci1516g0004 682 Coils Coil 632 659 - -
Prci1516g0004 682 FunFam Probable serine/threonine-protein kinase WNK1 50 146 - -
Prci1516g0004 682 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 50 675 - -
Prci1516g0004 682 SUPERFAMILY Protein kinase-like (PK-like) 67 364 IPR011009 -
Prci1516g0004 682 ProSiteProfiles Protein kinase domain profile. 65 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0004 682 CDD STKc_WNK 63 322 - -
Prci1516g0004 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Prci1516g0004 682 Gene3D Transferase(Phosphotransferase) domain 1 148 329 - -
Prci1516g0004 682 SMART serkin_6 65 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0004 682 Pfam Protein kinase domain 68 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0004 682 FunFam probable serine/threonine-protein kinase WNK9 148 327 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1516g0004 165 517 MAP Kinase Kinase Kinase AT1G49160 66.006 2.27e-166 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci1516g0004 Pkinase 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1516g0004 K08867 - gmx:121175054 778.474