Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1516g0001 ATGAGTGTACTGGGCATGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGATCCAACTTGTCGATACATTAGGTTATAAGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTACAGTCACCAGGTGACTTGGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAACATAGTAAAATTCTACAATTCCTGGATTGATAATAAGAACAAGACTGTTAACATCATCACGGAGTTGTTCTCTTCGGGTAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTTAAAGGATGGGCAAGACAGATATTAATGGGTTTAAACTACCTCCATGGTCACAACCCACCTATTATACACAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGAATTTATGGCACCCGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCATTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCGTATAGTGAATGCAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCCGCTTCCCTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGAATGTCAGCAAAGGAGCTTTTGATAGATCCTTTTCTTCAAATGAATAGTTTGGCAAGAAATCGTCGTCTATCCTTACCAGATATTGTCATCCCTAAATGTGGAGCCTTTGGAGATCGTATCCTCGTGTCAGAAGGTCCTGCTACTCAACATAACAGATCAAATTCCTTGGATCTTGATGATACTTGTGAATTACCTATGATCACTACATACGATGGTTCTGGTAACGCTTCACATTGTCAATGTGTTGAGGTACAAAAGTTGAAGAGAGGTGATATTTTCAATCTAAAAGGTGAAGAAAATGATGAGAATTCTGTGTCGATAGTTCTTCGGATAGCTGATCAAGGAGGGCGAGTAAGAAATATCCATTTCTTATTTTACCTAGATAGTGATACTGCTATTTCAGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTCCAGATCAAAATATAAAATTCATAGCTGAGTTGATAGATTTGTTATTGATTAATTTGGTTCCAAAGTGGAAACCTTGTGTAGATATTGCTCATTTGGTTTCACGAAGTTGTAGAAAAACTATTATTGGACAAAAAGATCTGGAGCTAGCAAAACAGAAGCAGCACTCAGAAGATTCTATACAAAATATTACTGAAGAGAAAGGTATCTCATGCTCGAATCGCAGCTCTCTTGCATCAGAAAAACATTATCACTCCAACTTGAATGAAATTTCATCCTATGGCAACATTGATCACGGAAATACAATCAAAATAGATGATTTGTGTTCTGAGACTAATGATAAGAAGTTATCTTTAGTTTCGTTCTTGTCTGTGGACTCAGCATTTAATGATTTCAACTTGCCAAGAGTGCCAGGAGAGACTGAATGCTCTTTTGTATCTGTAATGGAAGCATGGCCAAATTATCATAGGAGTAAGATATCAGAATTAGGAAGTCATGATATGTTAAGCTTCCCAGCCCATTCTAGTAATGTTTCTTCTTTATCTAACGTAGAAGATGAGTTGAAAATAGAGTTAGAAGTGATTGAACAGAAATATCTAGAGACAATTAAAGAAGCATCAAAAGTAAGATCTCAAGCTATCATGGAGGTTAGAGGAAGGTTACCCCAGAAGAAGATCCAATCATAA 1887 0.3773 MSVLGMQSLLILIFLKLIQLVDTLGYKAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDNKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPASQRMSAKELLIDPFLQMNSLARNRRLSLPDIVIPKCGAFGDRILVSEGPATQHNRSNSLDLDDTCELPMITTYDGSGNASHCQCVEVQKLKRGDIFNLKGEENDENSVSIVLRIADQGGRVRNIHFLFYLDSDTAISVSSEMVEQLELPDQNIKFIAELIDLLLINLVPKWKPCVDIAHLVSRSCRKTIIGQKDLELAKQKQHSEDSIQNITEEKGISCSNRSSLASEKHYHSNLNEISSYGNIDHGNTIKIDDLCSETNDKKLSLVSFLSVDSAFNDFNLPRVPGETECSFVSVMEAWPNYHRSKISELGSHDMLSFPAHSSNVSSLSNVEDELKIELEVIEQKYLETIKEASKVRSQAIMEVRGRLPQKKIQS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1516g0001 628 SMART serkin_6 18 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0001 628 CDD STKc_WNK 26 268 - -
Prci1516g0001 628 FunFam Probable serine/threonine-protein kinase WNK1 20 92 - -
Prci1516g0001 628 Gene3D Transferase(Phosphotransferase) domain 1 94 275 - -
Prci1516g0001 628 Pfam Protein kinase domain 26 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0001 628 SUPERFAMILY Protein kinase-like (PK-like) 26 310 IPR011009 -
Prci1516g0001 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Prci1516g0001 628 Coils Coil 578 605 - -
Prci1516g0001 628 ProSiteProfiles Protein kinase domain profile. 18 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1516g0001 628 FunFam probable serine/threonine-protein kinase WNK9 94 273 - -
Prci1516g0001 628 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 621 - -
Prci1516g0001 628 Gene3D Phosphorylase Kinase; domain 1 21 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1516g0001 111 463 MAP Kinase Kinase Kinase AT1G49160 66.006 1.02e-167 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci1516g0001 Pkinase 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1516g0001 K08867 - gmx:121175054 725.702