Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci150g0008 ATGGATCGTGATTGGGGTTCAAAGCCTGGCAGTGGGGGCGCTGCCTCCGCCCAGAATGAAGCCATCGACCGTCGTGAGCGTCTCCGCCGACTCGCCCTCGAGACTATTGATCTTGCCAAAGACCCCTACTTCATGCGCAATCATCTTGGCAGCTATGAGTGCAAACTTTGTCTCACTTTGCACAATAACGAAGGGAATTATCTGGCGCACACACAGGGTAAGCGGCATCAGACCAATTTGGCTAAGAGAGCAGCTCGTGAGGCCAAAGAGGCACCCGCCCAACCTCAGCCCCACAAGCGTAAAGTCTCCGTTCGCAAGACAGTGAAGATTGGTAGACCTGGGTACCGAGTGACCAAGCAATATGATCCTGAGACAAATCAGAGATCTCTTCTTTTCCAGATTGAATATCCTGAGATTGAAGACCTAGCAAAGCCAAGGCATCGATTTATGTCTTCTTATGAGCAGAGAGTGCAACCCTTTGATAAAAGATACCAGTATCTTTTGTGCGCAGCTGAACCATACGAAATCATTGCTTTCAAGGTTCCCAGCACAGAGATTGACAAGTCAACTCCAAAGTTTTTCTCACACTGGGACCCAGACACAAAGATGTTTACGTTGCAATTGTATTTCAAACCGAAGCCACCAGAGGCAAACAAACCCCAGCCTACCTCAGCAGCCAATAGCACAGCTGCACCGGGTGTTCCAGCAAGGCCTATGCCTCCACCATCTCAAGCTCCACCACCGCCACCTCCTCCGCCTCAAGGCTTACCACCTAGTGTGCTTCTTGGAAATCCTCCCAGAGCTCCACCACCTCCGATGCCTGGATCATTGCCCCCGCCACCCCCACCTATGTCAAATGGCCCTAGATCTGCATCTTCTGGTGGAATTGCTTCTATCCCACCTCCACCTCCTGTTGCCAGCAGCGCAACAGCAAGTTTCAACATGGGTACTAGGCCTCCATCTATGCCACCTGGGCAAGTTTTCCCGGACAACAAATGCAGGGCCAGGTTGCTCATCCGCCACCGCCGCCGCCTAGAATGGATAATTTAA 1050 0.5181 MDRDWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQYDPETNQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDTKMFTLQLYFKPKPPEANKPQPTSAANSTAAPGVPARPMPPPSQAPPPPPPPPQGLPPSVLLGNPPRAPPPPMPGSLPPPPPPMSNGPRSASSGGIASIPPPPPVASSATASFNMGTRPPSMPPGQVFPDNKCRARLLIRHRRRLEWII 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci150g0008 349 MobiDBLite consensus disorder prediction 234 287 - -
Prci150g0008 349 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Prci150g0008 349 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Prci150g0008 349 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Prci150g0008 349 MobiDBLite consensus disorder prediction 1 21 - -
Prci150g0008 349 Gene3D - 93 218 - -
Prci150g0008 349 Gene3D Classic Zinc Finger 46 89 - -
Prci150g0008 349 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 317 - -
Prci150g0008 349 FunFam Splicing factor 3a subunit 2 94 218 - -
Prci150g0008 349 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Prci150g0008 349 Pfam Zinc-finger of C2H2 type 52 76 - -
Prci150g0008 349 SMART CactinC_cactus_3 89 217 - -
Prci150g0008 349 MobiDBLite consensus disorder prediction 212 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci150g0008 1 228 C2H2 Transcription Factor Family AT2G32600 88.158 1.81e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci150g0008 K12826 - vvi:100245136 452.595