Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci150g0006 ATGGAGGATATCATTCAGGAGCAAGTTGTGGTGGCGTGCAGGGATCGGGCACAGATCATGAAGGGCAAGCGCACCAAGCGTCAAAGGACACCGTCCCCGATCAGGCTAGCCATAGGCTTGCCTTCTGCAACGGGCAGCAGCAGTGAGGTCTGTTCCGGTGGGTCTGACGTCCCGAACACGTCGTCATCTGAGTTGAGAGATAACACGCAGTCCACAACGACAACGTCGCCGACGGAGGAAGAGGAGGACATGGCCAATTGCTTGATTCTTTTGGCTCAAGGGAAATTCTCACATCCCGTGGCCGTACCTAAGGATGGGGCATACCTTTACCAGTGCAGGACTTGCGACCGAGGCTTCCCTTCGTTCCGAGCGCTTGGTGGACACAGAGCCAGACACAAGAAGATGAAGCCCAGCCCAGAAGAAAATAATCAAGATGGTGGGTGCGATGAGTACTGCACCACCACTGCTCTCTCCTTGAAATTATCCAACAGGGTTTCTTTGTGTAGCGGTAAATCGTCCAAAGTTCACGAGTGTTCCATTTGCGGGGCTGACTTCTCTTCCGGGCAAGCCTTGGGGGGTCACATGAGAAGGCACAGAACTTTGGTGAACGAGTCATCCCAGGACGTCAAGAAACCCAGAAACGTCTTCAAGCTGGACTTGAATCTTCCGGCTCCTGATGAGGATCATGATCACTCGGAATCCAAGTTTCCTTTTCACTCCAAAGACTCCGTCCTTGTCTTCTCGGCGTCTCCTTTGGTGGATTGTCATTACTGA 774 0.5284 MEDIIQEQVVVACRDRAQIMKGKRTKRQRTPSPIRLAIGLPSATGSSSEVCSGGSDVPNTSSSELRDNTQSTTTTSPTEEEEDMANCLILLAQGKFSHPVAVPKDGAYLYQCRTCDRGFPSFRALGGHRARHKKMKPSPEENNQDGGCDEYCTTTALSLKLSNRVSLCSGKSSKVHECSICGADFSSGQALGGHMRRHRTLVNESSQDVKKPRNVFKLDLNLPAPDEDHDHSESKFPFHSKDSVLVFSASPLVDCHY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci150g0006 257 PANTHER ZINC FINGER PROTEIN ZAT5 29 238 - -
Prci150g0006 257 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Prci150g0006 257 MobiDBLite consensus disorder prediction 38 81 - -
Prci150g0006 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 198 IPR013087 -
Prci150g0006 257 Pfam C2H2-type zinc finger 175 199 - -
Prci150g0006 257 Pfam C2H2-type zinc finger 110 134 - -
Prci150g0006 257 Gene3D Classic Zinc Finger 108 198 - -
Prci150g0006 257 SMART c2h2final6 110 132 IPR013087 -
Prci150g0006 257 SMART c2h2final6 176 198 IPR013087 -
Prci150g0006 257 MobiDBLite consensus disorder prediction 41 81 - -
Prci150g0006 257 SUPERFAMILY beta-beta-alpha zinc fingers 109 198 IPR036236 -
Prci150g0006 257 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Prci150g0006 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci150g0006 19 257 C2H2 Transcription Factor Family AT5G03510 40.418 1.28e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci150g0006 zf-C2H2_6 5.8e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci150g0006 - - pcin:129295621 518.85