Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2449 ATGGGTCCTGATTCTCCAGCTTCACTCGCTCCCGGCTTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCAGGCGCAAGGTCTCTGGCAGATCCTTTCGCTTCGACCCTATCGCCGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCGTGTCAGTCGAAGCTGAAAAGCAGGGACTTAGAGTGGTACTTCTTCAGTGCGCTGGACAAGAAGTATGGAAATGGGTCGAGGACGAATCGGGCCACTGAGAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCGGTTCGACACAGCTCTCGTACCGTTGGAATGAAGAAGACCCTTGTTTATCATGGCGGGCGGGCGCCGCGCGGTACCCGTACTAACTGGGTCATGCACGAATACAGGTTGGCTGATGAAGAATTGGCAAAGGCAGGAATACAGCAGGATGCGTTTGTGCTCTGTAGGATTTTCCATAAGAGTGGCACTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTATAGAGGAAGAATGGCAAGATGATGATGTTGCTGTGGCTCCACTGCTCGGTGATGAGGCTGCAACTGATGAAATAGTGGTTGGTGATGATGCTTTTGTTGAAACGGATGACCTTGACCAGTGCCTTGACATGGGTGTGGCATCTGAACGTGCTGATCATGCATTAAACTTCTATTATGGGGAGTGTAGCAGTTATCCTGAGCATTGCCAAGAATTGATTGCAGATCAGAAGCCCTTGGTAGGAACTGCTGAAACTTATGAGCCTCGAGATGACCTTTTATTGAATAAGCCTGAGCAACTTGCTTTGGATAGCAAACTAGTGAAAGATGGCATCAAGGCTGAAGCAAGTCATGAAGGATGTTTCTTGAATCACAATTACACATTTGATGAGACATACTTGGATGCTACTGATACTCTTCTTGCCAGTAATGGATCATTCCTGGAAACTGCTGATCTGGTGAATCCAGTTGAGGCAAATCCTGCTGAGACAGGTGCAGCTGATGCTGATGTACTAGAGTATCTTACGTACTTTAATGACAGTGATGATGTTTCTCAGTATATCTCTTTCGATTCTCCTGGGTTGGCAGGGAGTGAATACCCTGAAACTGACCAAGGACCACCTTTAACCCAACTGAATATGGGCGAAGAATCCAAGAATATTCTCATGGCAAGTAAAATTGATGTGGAAGCCCATTCTAGTGAAGAAGCTTCTTATTTGAAGCAGCGTCAGGAGGCATCGAAATTGGTGTCAGGAAATACATACCCATTTATGAAGCAGGACAGTCACTTGTTGGGCAGCATCCCTTCTCCCCCTGCATTTACTTCTGAGTTTCCTCCTAAAGAAATTGCTCTTCGTCATCATTCCACAGGTCAATGTTCCAATTCAGCTCATGTAACTGCTGGCATGATCAGAATAACAGACTTCACTGTAAGAGGCAACAGGTTGGACTGGATGCTGGGCAAAAATGGAGAGTTCAGTGTTGTAATCTCATCCTGCTTTTGGCCTGATGTTAACCCTGTTGCTTTAGTGCCTATTTCTGGTTTACTCTCTGGGAAGTCTGCATTTGTTGTGTCACACGGCTGGATTTTCTTGGTCTTCTTTTCAGTGCTGATTCTTTCACTGAGTTTCAAGGTTGGAAGTTTCATGTATCCCAGTAAATGA 1683 0.4676 MGPDSPASLAPGFRFHPTDEELVRYYLRRKVSGRSFRFDPIAVIDIYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPVRHSSRTVGMKKTLVYHGGRAPRGTRTNWVMHEYRLADEELAKAGIQQDAFVLCRIFHKSGTGPKNGEQYGAPFIEEEWQDDDVAVAPLLGDEAATDEIVVGDDAFVETDDLDQCLDMGVASERADHALNFYYGECSSYPEHCQELIADQKPLVGTAETYEPRDDLLLNKPEQLALDSKLVKDGIKAEASHEGCFLNHNYTFDETYLDATDTLLASNGSFLETADLVNPVEANPAETGAADADVLEYLTYFNDSDDVSQYISFDSPGLAGSEYPETDQGPPLTQLNMGEESKNILMASKIDVEAHSSEEASYLKQRQEASKLVSGNTYPFMKQDSHLLGSIPSPPAFTSEFPPKEIALRHHSTGQCSNSAHVTAGMIRITDFTVRGNRLDWMLGKNGEFSVVISSCFWPDVNPVALVPISGLLSGKSAFVVSHGWIFLVFFSVLILSLSFKVGSFMYPSK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2449 560 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Prci14g2449 560 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Prci14g2449 560 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Prci14g2449 560 FunFam Nac domain-containing protein 86 18 162 - -
Prci14g2449 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 196 - -
Prci14g2449 560 SUPERFAMILY NAC domain 8 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2449 Prci-Chr14 31158665 31162387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2449 1 552 NAC Transcription Factor Family AT5G04410 42.979 5.34e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci14g2449 NAM 5.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2449 - - qsa:O6P43_004975 639.802