Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2443 ATGACAGATTTTCAACCGCTACAACAGAAGCCTGAATCCACTGATGCCCATGCTGAGTTCGAATGTGGGCTGGAGGACTTTATGCGGGGCCACTTGGATGATTGCATGTCCTTTGCTTCATGTAGTTCTGCCCGAACTCAGGATGGGGAGGATGATGAGGGTGATCAACTAGTTAGGAGGAGAAGGAGATCTGATCTTGAGGTGGATGATTTAGCAGAGTCATCTGCTGCACGTCGGCGCCACTCACGGATTTTGAGCAGATGGGCTGCCCACCAGGCCCAAGAGATGATAACTACAATTGAGAGGAGGAATCGGGAGTCTGAATTAATGGCACTTGCAGGACTACACACGGTCTCAATGCTGGACTCCTCTTTTTTGAGGGGATCTCAGACTCCAACTTCTGGCCAGGAGGGAGCTGCAGAGAGGCCCAGCACTCAGGCTTCGGCAATTCTTCAGATGTGGCGCGAATTGGAGGATGAACACTTATTTAATCGTGCACGGGAAAGAATGAGGGAAAGGTTGCATCAACAAAGGAGTGCTGACTCTAATGCCAATGGATCAAGTACCATTTCAGATAGTAGGGGAAGTGAGAATCAGGGCAGTTTGGTGGATGCAAGTGAAAGTGAAAATGATTATGGGACTTGGTCACATGATCAGATTCAATCACGGCATGAAAATGGTGACCATAATGAGTCTAGCAGGGAGCAATCTCCTGATCTTGGTGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTGCGGGGATGGATGGAAAGTGGCATCAGTGATCATTCATCTAATGCAAGTCAGAGAAACAATAATCGCAGAGCAGAGTGGCTTGGTGAAACAGAGCGTGAAAGAGTAAGAATTGTCAGGGAGTGGGTGCAAATGACAAGTCAGCAGCGAGGTTCTCGTGGGAGCCGGAGGGATAGTCAAGCCACTGAAAGTGGTTCTCGAGCCGAGAGAGTCCATGATGGATTGTTAACTGATCATGATGAGGGCCAGCCAGAGCATGTGCGCAGGGATTTGTTGAGGTTGCGTGGAAGACAAGCTCTGGTTGACTTGCTTGTGAGGGTTGAAAGGGAAAGACAAAGAGAGCTTCAGGGTTTGTTGGAGCACCGTGCTGTTTCTGATTTTGCTCATCGAAACCGCATTCAGTCATTACTCAGAGGTAGATTCCTTCGAAATGAAAGAACTATAGAAGATGAGAGGCCTCCTTCCGTGGCTGCAAATGAATTAGTTCAGTTAAGACAACGTCACACAGTCTCTGGTTTAAGAGAAGGGTTTCGCTCAAGATTAGAAAATATTGTTCGTGGTCAAGCTAGCAGCAATTCTGATGCCACATCTAATAGTAGCATCAGTGAAACTAGAAGTGATGTGAACCAAGAAAACAATTCAATTGATGCCCAGCATGACAGTTATGAACAAGGGCAGATTAGGAGCCTGGAAACTGATGTGCAGCAGTTGGCTGATCACACAGGAACTTTTGTAAGCAGCACCACTGAGGGTATAAGTTGGCAAGAAACTAGTAATCAAGGACGGAACTGGCAGGAACGAGTTACCGAAGGTGGTCGTGGAAATTGGCAACGGAGAGCTTATGGTCCATTAAATCAGTTAAGAGATGGAAGTGCTGTTAGTGATTGGCGGCAGGATTCTCCAATAAATGTAGAAGGGGAAGATACTCATCCGTTAGAAGCTCGGGGAACTTGGCATGAGGATAATTCAAGGGAAGCTGCTGGTAATTGGTCTGCAGAACCTTCTGGCCTTCCAAGGAATCGACGAGGTGTTCCTTTTAGGAGATTCAATAGATTTCATCCTCCTGATGATGATAATGTATATAGCATGGAGCTTAGAGAACTCTTGAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGTGGTTTCCGTGAAAGTCTGGACCAATTAATCCAGTCATATGTGGAAAGGCAAAGTCGTGCACCTATTGACTGGGATTTGCACAGAAACTTGCCAACACCAACTCCTGCCTCACCTGATAGGGATCCTGAGCAACATGCAGATGACCGTAATGGGGTTCAACATGATGCCATTAATAGGCCTTCTCTAGTGTTGCCATCTCCACCAGTTCCTCCGCCTCAACCACTTTGGCACCAGGACTTGCATCAGACAGGATGGTCTCGCCATAGCATGCATCGATCTGAAATTGAATGGGAGATAATCAATGATTTGAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGTTGGAGGCTTGCATGGATATGCAACTGGAGCTCCAGCGCTCTGTCAGACAGGAAGTGTCTGCAGCGCTGAATCGGTCAGCAGGTGAAATTGGAATGGGGGCCGAGACATCTGAGGATGGGTCTAAATGGGGCCATGTGAAAAAGGGAACTTGTTGTGTTTGTTGTGATAGCCATATTGATTCGCTCTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCGAATGAATTAGTTCGTGGTGGAGGAAAGTGCCCTTTATGCCGAGCACCTATTGTGGAGGTGATCCGAGCATATTCCATTGTGTAG 2565 0.4706 MTDFQPLQQKPESTDAHAEFECGLEDFMRGHLDDCMSFASCSSARTQDGEDDEGDQLVRRRRRSDLEVDDLAESSAARRRHSRILSRWAAHQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQTPTSGQEGAAERPSTQASAILQMWRELEDEHLFNRARERMRERLHQQRSADSNANGSSTISDSRGSENQGSLVDASESENDYGTWSHDQIQSRHENGDHNESSREQSPDLGEVERERVRQIVRGWMESGISDHSSNASQRNNNRRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDSQATESGSRAERVHDGLLTDHDEGQPEHVRRDLLRLRGRQALVDLLVRVERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTIEDERPPSVAANELVQLRQRHTVSGLREGFRSRLENIVRGQASSNSDATSNSSISETRSDVNQENNSIDAQHDSYEQGQIRSLETDVQQLADHTGTFVSSTTEGISWQETSNQGRNWQERVTEGGRGNWQRRAYGPLNQLRDGSAVSDWRQDSPINVEGEDTHPLEARGTWHEDNSREAAGNWSAEPSGLPRNRRGVPFRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQSRAPIDWDLHRNLPTPTPASPDRDPEQHADDRNGVQHDAINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIINDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGEIGMGAETSEDGSKWGHVKKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVIRAYSIV 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2443 854 MobiDBLite consensus disorder prediction 221 244 - -
Prci14g2443 854 ProSiteProfiles Zinc finger RING-type profile. 802 841 IPR001841 -
Prci14g2443 854 MobiDBLite consensus disorder prediction 655 710 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 296 335 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 307 335 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 42 61 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 172 244 - -
Prci14g2443 854 Pfam Zinc finger, C3HC4 type (RING finger) 799 846 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 125 146 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 495 516 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 256 277 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 671 685 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 570 589 - -
Prci14g2443 854 SUPERFAMILY RING/U-box 801 847 - -
Prci14g2443 854 Coils Coil 731 751 - -
Prci14g2443 854 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 110 853 - -
Prci14g2443 854 CDD mRING-HC-C3HC5_NEU1 799 851 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 435 464 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 179 220 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 46 61 - -
Prci14g2443 854 MobiDBLite consensus disorder prediction 259 275 - -
Prci14g2443 854 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 789 852 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2443 Prci-Chr14 31106489 31112422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2443 802 848 C3H Transcription Factor Family AT3G06140 42.553 9.84e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2443 - - gmx:100805607 1342.41