Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2413 ATGACAGCAACCCAGTTTTCTGAGAGATCAACAATGGAGATGGAATCTGGTGTTCCTCCGGGGTTCAGATTTCGTCCGACAGAGGAAGAGCTCGTAGGGTACTACCTCAAGAGGAAGATAAACTCGTTAAAAATCGACCTAGATGTGATTGCAGAGATCGATCTCTACAAGATTGAACCATGGGACATCCAAGAAAGATGCAAGATGGGGTACGAGGAAGAGAAAGAATGGTATTTTTTCAGTCACAAGGACAAGAAATACCCAACAGGAACGAGAACAAACAGAGCGACGGCAGCAGGGTTCTGGAAAGCAACAGGTAGGGACAAGGCAGTGATGTCGAAGAAGAACAGAATCATTGGCATGAGGAAGACCCTTGTCTTCTACAAGGGACGTGCTCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATTTCGCCTCCAAACCTCCCACACGCTCCTCCTCAGGAAGAAGGATGGGTAG 483 0.472 MTATQFSERSTMEMESGVPPGFRFRPTEEELVGYYLKRKINSLKIDLDVIAEIDLYKIEPWDIQERCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQTSHTLLLRKKDG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2413 160 FunFam Nac domain-containing protein 86 27 159 - -
Prci14g2413 160 Gene3D NAC domain 27 159 IPR036093 GO:0003677|GO:0006355
Prci14g2413 160 MobiDBLite consensus disorder prediction 1 20 - -
Prci14g2413 160 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Prci14g2413 160 SUPERFAMILY NAC domain 9 152 IPR036093 GO:0003677|GO:0006355
Prci14g2413 160 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 149 - -
Prci14g2413 160 Pfam No apical meristem (NAM) protein 19 147 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2413 Prci-Chr14 30908537 30912786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2413 14 150 NAC Transcription Factor Family AT1G71930 81.752 3.79e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci14g2413 NAM 3.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2413 - - var:108325420 259.61