Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2410 ATGAGCTTCACCGACCAGATTCATCAAAACAAAAGTCATAAAGATCACCATCAAGATCCCTGCCTCCATGCCTTGATCCAAACAGGTGGACACACATGCACTGCCGTGTTAAACGCAGCCTGTGATCTGAACCTCTTTGATATCATCGCAAAGGGAAGCCCAAACAATGGCGGTGGCCTGATTACCGTGTCTGAGATTGCTTCTCAGCTTCCTGTTCCGATGTCTAAGGTGTCCACGTCAAAACTCGACCGCGTGCTTCGTTTTCTGGTGAGTTTCTCAGTCCTCACCTGCTCTGCTCGCTCCAACGAAGAAGACGGAAGCATGGAGAAGCTGTACGGACTCTCCCCCACCGGAAAATACTTCCTCAAGAAACAAGACGGTACTCCTGCCTGGGCTTCCTTGTTCCCCAAGCTTTCTTACCACCCGTACATGGCTCGAGTCTGGCTACACTGCAAGGAGGCGGTCCTGGACGGAGGAGTGGACATATTCATTAAGAAATTGAATGGACAGAGAATGTACGAGTACGTGGAGAAGGATGTAGAGCTGAAGAACTTGTTTCAGAGGACAATGGCAGAAATATCTGCACTGCACATGGAAAAGATTCTGGAAGTGTACAAAGGCTTCGAAGGAATATCTCAGCTCGTGGACGTGGCTGGTGGTATTGGTCAGAGCCTCATGATGATCATCTCCAAGTATCCTTCTTTACATGGTGTTAATTTTGACCTGCCGCGTGTTGTCCAAGACGCCCCTCACTTCCCAGGACTGACACATGTAGGAGGGGACATGTTCAAGAGTGTTCCGGAAGGAGAAGCTATAATGATCAAGGGAACAACTCATAACTGGTCGGACGAGAAGTGCGTGCTACTGTTTAGGAATTGCCGCGAAGCATTGAAGGAAGGTGGAAAGGTGATAGTAATAGACCTGATGATGCCACAAGATCCAGAAATGACCATGTCTGCAAAATATCTGAGCCTCCTTGACTCTGTCATGTTGCTGCAAGGAGGTGGAATGGAAAGAACTGAGAAGGAGTTTGAGATTCTGTGCAAGAGAGCTGGCTTTTCTCGCTTCAACCTTGCTTGTCGTGCTTTGTCCAATGTCTTAGGAGTCATGGAATTTTATAAATAA 1125 0.4782 MSFTDQIHQNKSHKDHHQDPCLHALIQTGGHTCTAVLNAACDLNLFDIIAKGSPNNGGGLITVSEIASQLPVPMSKVSTSKLDRVLRFLVSFSVLTCSARSNEEDGSMEKLYGLSPTGKYFLKKQDGTPAWASLFPKLSYHPYMARVWLHCKEAVLDGGVDIFIKKLNGQRMYEYVEKDVELKNLFQRTMAEISALHMEKILEVYKGFEGISQLVDVAGGIGQSLMMIISKYPSLHGVNFDLPRVVQDAPHFPGLTHVGGDMFKSVPEGEAIMIKGTTHNWSDEKCVLLFRNCREALKEGGKVIVIDLMMPQDPEMTMSAKYLSLLDSVMLLQGGGMERTEKEFEILCKRAGFSRFNLACRALSNVLGVMEFYK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2410 374 Pfam Dimerisation domain 36 90 IPR012967 GO:0046983
Prci14g2410 374 FunFam Caffeic acid 3-O-methyltransferase 3 121 - -
Prci14g2410 374 SUPERFAMILY "Winged helix" DNA-binding domain 17 126 IPR036390 -
Prci14g2410 374 Pfam O-methyltransferase domain 148 354 IPR001077 GO:0008171
Prci14g2410 374 Gene3D Vaccinia Virus protein VP39 130 374 IPR029063 -
Prci14g2410 374 Gene3D - 2 121 IPR036388 -
Prci14g2410 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 374 IPR016461 GO:0008168
Prci14g2410 374 PANTHER O-METHYLTRANSFERASE 33 365 IPR016461 GO:0008168
Prci14g2410 374 PIRSF O-mtase 1 374 IPR016461 GO:0008168
Prci14g2410 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2410 Prci-Chr14 30863610 30865551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2410 37 363 Monolignol Biosynthesis Gene Families AT5G54160 45.897 1.48e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2410 - - qsu:112031144 363.229