Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2407 ATGGGCAGGTATGGGTACGATTCGTCTGTCCTCTACGTTTCTCTGTGCTTCTGGTTCTGTCCAATGGCGCTGTGTCTGCTATCCCGGAACCAAACCAGTACCATGACCGCGCTCTCCCTACTACTTCATCAAACTGGCTTGACTGATTCATGGAATATTAAGGTGCACCCGAATCCATGTCAGTGGAAGGGCGTCGCTTGCGACCCCACCAACTCCTCTGTAATCAAACTTTCGCTATCTGGGAATTCCATCTCTTCTTCCGAATTTGTGACTCGTCTTTGCCAGATCGAAAGTTTGCAGCATCTTGATCTTTCTGTTAATGTCTTCAGCTCAATTCCAGACGATTTCATCTCTGACTGTGGGAAGGTTCAGGGGTTAAAGTTTCTCAATTTTAGTTACAACAAAATATTCGGTCCTTTGCCTACTTTTCATGGATTTGATGCCTTAGAGTCCCTGGATATATCTTTCAATACTTTTTCAGGGAAAATTGAATCACAGTTAGCCGGGTTAGGGAACCTCAAGAGCTTAAATCTTAGTTTCAATTCTTTCAATGGGTCCCTCCCTACCAAACTGGGAAATTCCGGGGCTTTGGAGCAGCTTGTGCTGAGCCTTAATCACTTTGAAGGTACAATCCCTGCTGAAATCCTGAGTTACACAAATTTGACTTTGCTTGACCTTGGACGAAATGAGCTTACAGGTTCTATTCCTAGCAGCATCGGAGATCTATCCAGATTGCAAGTTTTAATTCTATCCTCTAATAACCTTGGAGGGACAGTCCCAAGTGCACTCTCGAACATCCAAACCCTCCGCCGTTTTGCAGCCAATGAAAACCACTTCGATGGTTCTGTTCCCCGCGGAATTACGAGATTTCTTAGTAACTTGGATCTCAGTTATAACAAGTTGTCCGGGCCTATTCCAGCAGACCTTTTTTCACAATCCAATTTGCAGCATGTGGATTTGTCCAGTAATTCGTTATCCGGGCCTTTACCTGCAGTCATATCTTCTAGCATTATCAGGTTGAGATTAGGGGGTAATTCCCTGAATGGGACGATACCTTCAAAAGCATTTTCGACAGTCCAGAGTTTGACGTATATCGAACTGGAGGCCAATAAATTGACAGGCCCAATACCCGGCGAGGTGGGTTCTTGCCAGAATCTGGCCTTGTTGAACTTGGCTCAGAATCAACTGTCTGGGAGATTGCCTGCAGAGCTTGGAAAGCTCCGCAATCTTCAAGTCTTGCAGCTTCAAGGGAATGAGCTTTCTGGACCAATACCAACTCAACTGTCTCAGCTACAGAAGTTGTCAACTCTGAATTTGAGCCACAATTCTCTGAACGGAACCATTCCACCAGCAATGTTCAATTTGGTAAAGCTTAGTAAGATTTACTTACAGCGAAACAATCTCAGTGGTTCTATTCCCACATCTATAAGCAGCATGGCGTCTCTTATGGAACTTCAACTTGGAGAAAACCAGCTAAGTGGTTTAATTCCAAAAATGCCATGGAATCTTCAGATTGCGTTGAATCTCAGCAGCAATCTCTTTACAGGGCCTATTCCCAGCACTCTTGCTGGCTTGAATAACCTGGAAATCATGGATCTCTCGAATAACAAATTTTCTGGTGAAATTCCTGATTTTCTCACCAAGATGCCGGCTTTGACACAGTTGGAACTTTCTAATAATGAGTTGTCCGGAGTCATTCCCGACTTCAATTCTCATGTTAAAGTCGATTCAGGTGGAAATAAAGCTCTCGAAAACAAAACTGCGTCTTCTAACACTTCCCCAATATCTCCTAAGGGAAATCCTGTTGTCACGGCAGTTCTTGTTGCAATTGCAGCTGCAGTTTTTCTTGTTGGCCTGGTAACTGTGCTGGCTGTATTAATCTCACGACGTTTATACAGGGTAAATGACGAACACTTACAACCACATGATGACCACCCTCAACCCCCTCTGGTCATCCAAGGTCACTTATTAACTCCAAATGGAATTCACAGATCCAACATTGATTTCTCTAAGGCCATGAAAGATGTTGCTGAAACATCAAACATTACCCTGAAAACTAGGTTTTCAACTTATTATAAGACTATTATGCCATCTGGATCAATCTACTTTGTCAAGAAGCTTAACTGGAGTGAGAAGCTATTCCCACTGGGCAGTCAAGATAAATTTGGTAAAGAGCTAGAGGTCTTGGCGAAATTGAACAATTCAAATGTCATGACTCCTTTGGCTTATGTTCTATCCACTGACAGTGCTTATATACTGTATGAATTTATCTCAAGTGGCTCCCTTTATGATGCTCTTCACGGAAGCTTGGAAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGCGGCTCAAGGTCTCTCTTTTCTGCATGGATTCGCCTCAGGTCCAATTCTTCTCCTTGACCTATCAAGTAAAAGTATAATGCTGAAGTCTCTCAAGGAGCCTCTGGTTGGAGATATTGAACTCTACAAGGTGATTGATCCTTCAAAAAGCACAGGAAGTTTTTCCGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCTGAGTATGCATACACAATGAGAGTGACGATGGCTGGGAATGTGTACAGCTTTGGGGTAATCCTGCTGGAATTGTTAACAGGAAAGCCAGCAGTGACTGATGGAACTGAATTGGTGAAGTGGGTAACGCGCAACTCAACGAAGCAAGATCACATTCTGGATTTTAATGTCAGTAGAACATCTCAGGCTGTCAAAAACCAGATGCTTGCAATCCTTCAGATAGCTCTTGCTTGTGTCAGTTCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGAATGCTCCTGAATGCACGATAA 2853 0.435 MGRYGYDSSVLYVSLCFWFCPMALCLLSRNQTSTMTALSLLLHQTGLTDSWNIKVHPNPCQWKGVACDPTNSSVIKLSLSGNSISSSEFVTRLCQIESLQHLDLSVNVFSSIPDDFISDCGKVQGLKFLNFSYNKIFGPLPTFHGFDALESLDISFNTFSGKIESQLAGLGNLKSLNLSFNSFNGSLPTKLGNSGALEQLVLSLNHFEGTIPAEILSYTNLTLLDLGRNELTGSIPSSIGDLSRLQVLILSSNNLGGTVPSALSNIQTLRRFAANENHFDGSVPRGITRFLSNLDLSYNKLSGPIPADLFSQSNLQHVDLSSNSLSGPLPAVISSSIIRLRLGGNSLNGTIPSKAFSTVQSLTYIELEANKLTGPIPGEVGSCQNLALLNLAQNQLSGRLPAELGKLRNLQVLQLQGNELSGPIPTQLSQLQKLSTLNLSHNSLNGTIPPAMFNLVKLSKIYLQRNNLSGSIPTSISSMASLMELQLGENQLSGLIPKMPWNLQIALNLSSNLFTGPIPSTLAGLNNLEIMDLSNNKFSGEIPDFLTKMPALTQLELSNNELSGVIPDFNSHVKVDSGGNKALENKTASSNTSPISPKGNPVVTAVLVAIAAAVFLVGLVTVLAVLISRRLYRVNDEHLQPHDDHPQPPLVIQGHLLTPNGIHRSNIDFSKAMKDVAETSNITLKTRFSTYYKTIMPSGSIYFVKKLNWSEKLFPLGSQDKFGKELEVLAKLNNSNVMTPLAYVLSTDSAYILYEFISSGSLYDALHGSLENSLDWASRYSIAVGAAQGLSFLHGFASGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTDGTELVKWVTRNSTKQDHILDFNVSRTSQAVKNQMLAILQIALACVSSSPEARPKMKSVLRMLLNAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2407 950 Gene3D Phosphorylase Kinase; domain 1 665 756 - -
Prci14g2407 950 Pfam Leucine rich repeat N-terminal domain 44 68 IPR013210 -
Prci14g2407 950 Gene3D Ribonuclease Inhibitor 289 593 IPR032675 -
Prci14g2407 950 PANTHER LEUCINE RICH REPEAT KINASE 2 72 212 - -
Prci14g2407 950 PRINTS Leucine-rich repeat signature 431 444 - -
Prci14g2407 950 PRINTS Leucine-rich repeat signature 291 304 - -
Prci14g2407 950 ProSiteProfiles Protein kinase domain profile. 677 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2407 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 757 950 - -
Prci14g2407 950 SUPERFAMILY Protein kinase-like (PK-like) 688 946 IPR011009 -
Prci14g2407 950 Gene3D Ribonuclease Inhibitor 34 185 IPR032675 -
Prci14g2407 950 Gene3D Ribonuclease Inhibitor 186 288 IPR032675 -
Prci14g2407 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 645 756 - -
Prci14g2407 950 SUPERFAMILY L domain-like 56 330 - -
Prci14g2407 950 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 332 594 - -
Prci14g2407 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 283 - -
Prci14g2407 950 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Prci14g2407 950 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Prci14g2407 950 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 189 - -
Prci14g2407 950 SMART LRR_typ_2 407 430 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 525 548 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 242 265 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 170 194 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 479 502 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 549 572 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 431 455 IPR003591 -
Prci14g2407 950 SMART LRR_typ_2 96 119 IPR003591 -
Prci14g2407 950 Gene3D Transferase(Phosphotransferase) domain 1 757 950 - -
Prci14g2407 950 SUPERFAMILY RNI-like 258 566 - -
Prci14g2407 950 Pfam Protein tyrosine and serine/threonine kinase 719 946 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2407 Prci-Chr14 30804102 30809024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2407 149 946 Receptor kinase-like Gene Family AT2G41820 38.768 1.85e-158 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci14g2407 PK_Tyr_Ser-Thr 3.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2407 - - qsa:O6P43_004096 1129.01