Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2405 ATGGAGCAAATCTGCAATGTGGAAGAGCATGAATCAAAAGATGAAGAAGACATGGAGGAGGGTGAGAACCTTCTACCTGGGTCCTATGAGATATTACAGTTAGAAAAAGAAGAAATCATGGCACCTCATACACACTTCTGTACGATTTGTGGGAAGGGGTTCAAGCGAGATGCAAATCTTCGGATGCACATGCGAGGTCATGGTGATGAATACAAAACCCCAGCAGCGCTTGCTAAACCTAACAAAGAATCTGGGCCTGAGCCAAAGCTTATAAAGAGGTATTCCTGCCCCTATGCAGGCTGCAAGCGAAACAAGGATCACAGGAAGTTTCAACCTCTGAAGACAATCTTATGTGTCAAAAACCATTACAAAAGAACACACTGTGACAAGAGTTACATTTGCAGCAGGTGCCACACAAAGAAGTTTTCAGTCATGGCTGATCTAAAAACTCATGAAAAGCACTGTGGAAAGGACAAATGGCTCTGTTCATGTGGCACAACTTTTTCAAGGAAAGACAAGCTTTTTGGGCACATTGCTCTTTTCCAAGGTCATACACCAGCCATTCCCTCAGATGACGCAAAAGCCTCGGCTGGGCCACCTGATCTTGAAAGCCAAGAAAACAGCAGTAAGGTAGAAGGTGTAAACTTGAGTTTTGCACCAAATACTTCTGGAGAGAATGGAGTTCAAAACATCATGGATGTGAAAGGTGATATTGATGATCCTATCAATTATTTATCTTCGTTGAACTTTGATACCTCTAACTTTGGTGGCTTTAATGAATTCCCCCGACCTTCATTCGAAGACTCGGAAGTTTCATTCTCCTTCATCATGCCTGGATCTTTCAATTACAATCAGAAGATTGGAGGAGTAGTTTCTGATAATCTTTAG 888 0.4223 MEQICNVEEHESKDEEDMEEGENLLPGSYEILQLEKEEIMAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPNKESGPEPKLIKRYSCPYAGCKRNKDHRKFQPLKTILCVKNHYKRTHCDKSYICSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPSDDAKASAGPPDLESQENSSKVEGVNLSFAPNTSGENGVQNIMDVKGDIDDPINYLSSLNFDTSNFGGFNEFPRPSFEDSEVSFSFIMPGSFNYNQKIGGVVSDNL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2405 295 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Prci14g2405 295 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 6 268 IPR044300 GO:0010044|GO:0010447
Prci14g2405 295 Gene3D Classic Zinc Finger 28 98 - -
Prci14g2405 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Prci14g2405 295 MobiDBLite consensus disorder prediction 1 22 - -
Prci14g2405 295 SMART c2h2final6 94 127 IPR013087 -
Prci14g2405 295 SMART c2h2final6 45 67 IPR013087 -
Prci14g2405 295 SMART c2h2final6 132 154 IPR013087 -
Prci14g2405 295 MobiDBLite consensus disorder prediction 189 210 - -
Prci14g2405 295 SUPERFAMILY beta-beta-alpha zinc fingers 44 69 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2405 Prci-Chr14 30789227 30790565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2405 13 293 C2H2 Transcription Factor Family AT1G34370 68.750 5.56e-140 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci14g2405 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2405 - - pcin:129292903 606.675