Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2397 ATGGATCCTCATTCTCTCTCCCCTCCCTCCAAGCTCCCTCCTCCTCCCACCACCATCACTCCTGCTAAACCTTCCTCTCTTCAGCTCGAGCCCACTACCTCCCCTGAGCCCAGTCCTCTTCGTAAGATTGTCGCCGTCGCCTCCATCGCCGCCGGCGTTCAGTTCGGCTGGGCTCTCCAGCTTTCCCTCTTGACCCCTTACGTTCAACTCCTCGGCATCCCCCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGATAGTCCAACCTATTGTTGGCTTCCACAGCGACCGCTGCACTTCCCGATTCGGACGCCGGCGTCCTTTCATTGCCGCCGGAGCTGTCTCTGTCGCCGTCGCCGTGTTCCTCATCGGCTACGCGGCCGACATGGGCTACATGTTTGGTGACTCCTTGGTCAAGAAAACCCGGCCTCGCGCCATCACCATATTCGTCGTCGGCTTCTGGATCCTCGACGTGGCCAACAACATGCTCCAGGGGCCGTGCCGGGCCCTCCTGGCCGACCTGGCCGCCGGCGACCAGCGCAAGACGCGAACCGCGAACTCGTTCTTCTCGTTCTTCATGGCCGTCGGGAACGTCCTCGGTTACGCTGCCGGGTCGTTCAGCAAACTCCACAAGATGTTCCCGTTCACGATGACCAAAGCCTGCGACGTCTACTGCGCGAACCTCAAGAGCTGCTTCTTTCTCTCCATTGCACTACTGGCGACTGTCGCCACCATTGCCCTCACGTACGTGAAGGAGAAGAAGGTGCCGTCGTCGGGTGATAAATCAACGAAGGAAGCCGGTGGTGCGGAGGGAAACGAAGAGGCGGAAGAAGGATCAAGATCGTCGCGACCAATGCCTTGCTTCGGGGAAATATGGGGTGCTCTGCGAGTGATGGAGAAGCCGATGTGGATCCTGCTACTAGTAACGTGTCTCAACTGGATTGCTTGGTTTCCGTTCTTGCTGTTCGACACTGATTGGATGGGGAAGGAGGTATTTGGCGGGCAGGTGGGAGAAGGGAGGGTTTACGATATGGGGGTGCGCGCCGGTGCATTGGGGCTCATGCTCAATTCCGTGGTGCTGGGAGTCACGTCCCTGAGCATCGAGGTTCTGGCGCGTGGGGTTGGGGGCGTCAAGAGGCTCTGGGGAATAGTGAACTTCATGCTCGCCATCGGTTTAGCGCTCACTGTGCTGATTACAAAAATCGCCGACCATTCAAGACGGTACACCGTCAGCCACGATGGCATCCTGGAGCCTCTGCCGCCCTCCGCCGGAGTGAAAGGTGGCGCGTTGGCTCTCTTTGCGGTGCTGGGCGTCCCCCTTGCGGTTACATTCAGTATTCCTTTCGCTCTAGCATCTATATTTTCCAACACTTCAGGGGCAGGCCAAGGGCTATCTTTGGGAGTTCTCAATCTTTCAATTGTCATTCCACAGATGGTGATTTCTGTGGCAAGTGGACCATGGGATGCTTTGTTTGGTGGTGGCAACTTGCCAGCATTTGTGGTGGGCTCGGTGGCAGCGGCGATCAGTGGCGTATTAGCGATATTTCTACTGCCATCTCCAGCGCCGGATTTGGCCAACGCAGCCGCGGTGGCGGCCGGAGGCTTCCATTAA 1626 0.583 MDPHSLSPPSKLPPPPTTITPAKPSSLQLEPTTSPEPSPLRKIVAVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMIVQPIVGFHSDRCTSRFGRRRPFIAAGAVSVAVAVFLIGYAADMGYMFGDSLVKKTRPRAITIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSFSKLHKMFPFTMTKACDVYCANLKSCFFLSIALLATVATIALTYVKEKKVPSSGDKSTKEAGGAEGNEEAEEGSRSSRPMPCFGEIWGALRVMEKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVFGGQVGEGRVYDMGVRAGALGLMLNSVVLGVTSLSIEVLARGVGGVKRLWGIVNFMLAIGLALTVLITKIADHSRRYTVSHDGILEPLPPSAGVKGGALALFAVLGVPLAVTFSIPFALASIFSNTSGAGQGLSLGVLNLSIVIPQMVISVASGPWDALFGGGNLPAFVVGSVAAAISGVLAIFLLPSPAPDLANAAAVAAGGFH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2397 541 MobiDBLite consensus disorder prediction 1 21 - -
Prci14g2397 541 MobiDBLite consensus disorder prediction 261 285 - -
Prci14g2397 541 MobiDBLite consensus disorder prediction 1 38 - -
Prci14g2397 541 MobiDBLite consensus disorder prediction 261 288 - -
Prci14g2397 541 CDD MFS_SLC45_SUC 43 520 - -
Prci14g2397 541 NCBIfam sucrose/proton symporter 39 527 IPR005989 GO:0005886|GO:0008515|GO:0015770
Prci14g2397 541 FunFam Sucrose transport protein 37 522 - -
Prci14g2397 541 Gene3D MFS general substrate transporter like domains 36 536 IPR036259 -
Prci14g2397 541 Pfam MFS/sugar transport protein 51 269 - -
Prci14g2397 541 SUPERFAMILY MFS general substrate transporter 41 526 IPR036259 -
Prci14g2397 541 PANTHER SUGAR TRANSPORTER 40 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2397 Prci-Chr14 30779094 30782242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2397 22 541 Sucrose Transporter Gene Family AT1G71890 65.283 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2397 K15378 - gmx:547679 772.696