Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2387 ATGGAGAGAAAGGCCTGGGCTTCTGCTTTCTTCTGGTGGGTCTCGCTAATTCATCCATTGTGGTTGATTTCTGCAAACACGGAAGGTGATGCTTTACATAGCCTTAGGACAAATTTACTGGACCCTAACAATGTTTTACAAAGTTGGGACCCTACGCTTGTCAATCCTTGCACATGGTTTCATGTAACATGCAACAATGATAACAGTGTAATAAGAGTGGATCTAGGAAATGCTGATTTATCTGGTCAACTTGTTCCACAGCTTGGCCAGCTCAAGAATTTGCAGTACTTCAATAATATTACTGGCCCAATTCCAAGTGACTTAGGGAATCTTACTAGCCTGGTGAGCTTGGATCTGTACTTAAACAGTTTCACTGGTCCCATCCCTGATTCTTTGGGCAAGTTGTCAAAGTTGCGATTCCTCCGGCTTAATAACAACAGCTTGTCGGGTCCCATTCCCATGTCATTGACCAATATTTCATCTCTCCAAGTGCTGGATTTATCTAACAACCGTCTCTCTGGTGTGGTTCCAGATAATGGTTCCTTCTCATTATTCACTCCTATCAGTTTTGCTAACAACCTGGGTCTTTGTGGGCCAGTAACTGGGCACCCTTGTCCTGGCTCTCCTCCATTTTCTCCTCCACCCCCTTTTGTCCCACCAGCCCCAATTTCTGTGCCAGGAGGTAATAGTGCCACTGGGGCAATTGCTGGAGGAGTTGCTGCTGGTGCTGCTTTGTTATTCGCGGCTCCTGCCATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTCGATGTGCCTGCTGAAGAGGATCCTGAAGTTCATCTTGGACAGCTCAAAAGGTTCTCACTACGAGAACTGCAAGTTGCAACTGATAGTTTCAGCAATAAGAACATTCTGGGAAGGGGTGGATTTGGTAAAGTATACAAGGGGCGCTTGGCTGATGGTTCATTGGTTGCTGTGAAAAGACTGAAAGAGGAACGTACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTACATCGAAATCTTCTTCGATTGCGTGGATTCTGTATGACACCAACTGAGAGGCTGCTTGTTTATCCCTACATGGCTAATGGGAGTGTTGCCTCATGCCTAAGAGAGCGCCCAGCACATCAACCTCCCCTGGATTGGCCAACAAGGAGACGAATTGCATTGGGTTCTGCAAGGGGTCTTTCTTATTTGCATGATCATTGTGATCCCAAGATTATTCATCGAGACGTGAAAGCTGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGGCTGGCAAAACTTATGGACTACAAGGATACCCATGTCACCACTGCTGTTCGGGGCACAATTGGGCATATAGCTCCAGAGTACCTATCTACTGGGAAATCTTCTGAGAAAACTGATGTTTTTGGGTATGGTATCATGCTTTTGGAGTTGATTACTGGACAAAGAGCTTTTGACCTTGCCCGGCTAGCAAATGATGATGATGTTATGTTACTTGATTGGGTAAAAGGACTTCTGAAGGAGAAGAAGCTGGAAATGCTGGTTGATCCTGATCTACAAAACAATTACGTTGAAGCCGAGGTAGAACAGCTAATTCAGGTTGCACTGCTGTGCACGCAAGGTTCCCCTTTGGACCGGCCTAAGATGTCGGAAGTTGTGAGAATGCTTGAAGGCGATGGCTTGGCTGAGCGATGGGATGAGTGGCAAAAGGTGGAAGTGTACCGCCAGGAAGTGGAGCTAGCCCCTCATCCTGGTTCTGATTGGCTTGTTGACTCAACCGAAAATCTACATGCAGTTGAGCTATCAGGTCCAAGGTGA 1863 0.4638 MERKAWASAFFWWVSLIHPLWLISANTEGDALHSLRTNLLDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNADLSGQLVPQLGQLKNLQYFNNITGPIPSDLGNLTSLVSLDLYLNSFTGPIPDSLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLGLCGPVTGHPCPGSPPFSPPPPFVPPAPISVPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPAHQPPLDWPTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPLDRPKMSEVVRMLEGDGLAERWDEWQKVEVYRQEVELAPHPGSDWLVDSTENLHAVELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2387 620 FunFam Somatic embryogenesis receptor kinase 1 24 207 - -
Prci14g2387 620 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Prci14g2387 620 ProSiteProfiles Leucine-rich repeat profile. 161 182 IPR001611 GO:0005515
Prci14g2387 620 Gene3D Transferase(Phosphotransferase) domain 1 374 591 - -
Prci14g2387 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Prci14g2387 620 FunFam Somatic embryogenesis receptor-like kinase 1 374 591 - -
Prci14g2387 620 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Prci14g2387 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Prci14g2387 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 582 - -
Prci14g2387 620 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Prci14g2387 620 SMART serkin_6 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2387 620 SUPERFAMILY L domain-like 27 186 - -
Prci14g2387 620 Gene3D Ribonuclease Inhibitor 24 207 IPR032675 -
Prci14g2387 620 Pfam Protein kinase domain 298 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2387 620 SUPERFAMILY Protein kinase-like (PK-like) 276 572 IPR011009 -
Prci14g2387 620 ProSiteProfiles Protein kinase domain profile. 297 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2387 Prci-Chr14 30689174 30695572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2387 11 620 Receptor kinase-like Gene Family AT1G71830 88.350 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci14g2387 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2387 K13418 - gmx:100789884 1097.03