LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g2354	ATGGCGGATACGGAGATGGGGACGCCGACGGCAGCGTCGGCACCGGCTACGCTGGGGACTCCGGCGCCGCTGTTCTCGTCGCTGCACGTGGACTCTCTGACATACGAGCGGAACGCAATGCCGATGTGCCATTGTTTGCCAACGAAGGCCCACACATGCTTCGCTGATTTCTCTGTCCCCAACGTGTCTCTCACGCGCAAGATCGGAGCAGAGTTCGTGGGCACCTTCCTACTGATGTTCGCCGCCTCGGCAGGACCCATCCTGAACGAGAAGTACAACGGAGCAGAGAGCCTCACCGGCAACGCAGCTTGTGCCGGCTTAGGCGTCATGATCGTAATCTTGTCCACCGGTCACATCTCCGGCGCTCACCTCAACCCTTCCCTGACCATCGCCTTCGCCGCCTTCCGCCACTTCCCGTGGGTCCACGTCCCCGCCTACATCGCCGCCCAGGTTTCGGCCTCCATCTGCGCCTCCTTTGCTCTCAAGGGCATCTTCAATCCTTACGAGTCCGGAGGCGTTACCATTCCTTCTGTGAGCACCACCGTTGGCCAGGCTTTTGCGCTCGAGTTCATCATCACTTTTAATCTTCTCTTCGTCGTCACTGCTGTTGCCACCGATACTCGTGCAGTTGGGGAATTGGCCGGAATTGCTGTTGGAGCCACAGTTTTGCTCAACATTCTGATATCTGGGCCGGCAAGTGGCGGTTCAATGAACCCGGTTCGCACCTTGGGTCCCGCCGTGGCTGCAGGAAATTTCAAGCACCTATGGATATATATGATCGCTCCCACCCTCGGAGCTCTGGCCGGTGCTGGTGTTTATACTATCGTCAAGCTCCGCAGCGACGAGGCTGAGCAGCCACGCCAGGTTCGGAGCTTCCGTCGCTAG	885	0.5898	MADTEMGTPTAASAPATLGTPAPLFSSLHVDSLTYERNAMPMCHCLPTKAHTCFADFSVPNVSLTRKIGAEFVGTFLLMFAASAGPILNEKYNGAESLTGNAACAGLGVMIVILSTGHISGAHLNPSLTIAFAAFRHFPWVHVPAYIAAQVSASICASFALKGIFNPYESGGVTIPSVSTTVGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNFKHLWIYMIAPTLGALAGAGVYTIVKLRSDEAEQPRQVRSFRR	294

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g2354	294	PANTHER	AQUAPORIN NIP2-1	57	282	IPR034294	-
	Prci14g2354	294	Pfam	Major intrinsic protein	61	273	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Prci14g2354	294	ProSitePatterns	MIP family signature.	123	131	IPR022357	-
	Prci14g2354	294	FunFam	Aquaporin NIP2-1	54	288	-	-
	Prci14g2354	294	SUPERFAMILY	Aquaporin-like	62	284	IPR023271	-
	Prci14g2354	294	Gene3D	Glycerol uptake facilitator protein.	48	290	IPR023271	-
	Prci14g2354	294	CDD	MIP	66	276	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Prci14g2354	294	PRINTS	Major intrinsic protein family signature	256	276	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Prci14g2354	294	PRINTS	Major intrinsic protein family signature	105	129	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Prci14g2354	294	PRINTS	Major intrinsic protein family signature	219	241	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g2354	Prci-Chr14	30328667	30333847	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g2354	24	294	Major Intrinsic Protein MIP	AT4G10380	73.022	7.60e-147	412

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g2354	K09874		-	apan:127258234	471.47

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