Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2354 ATGGCGGATACGGAGATGGGGACGCCGACGGCAGCGTCGGCACCGGCTACGCTGGGGACTCCGGCGCCGCTGTTCTCGTCGCTGCACGTGGACTCTCTGACATACGAGCGGAACGCAATGCCGATGTGCCATTGTTTGCCAACGAAGGCCCACACATGCTTCGCTGATTTCTCTGTCCCCAACGTGTCTCTCACGCGCAAGATCGGAGCAGAGTTCGTGGGCACCTTCCTACTGATGTTCGCCGCCTCGGCAGGACCCATCCTGAACGAGAAGTACAACGGAGCAGAGAGCCTCACCGGCAACGCAGCTTGTGCCGGCTTAGGCGTCATGATCGTAATCTTGTCCACCGGTCACATCTCCGGCGCTCACCTCAACCCTTCCCTGACCATCGCCTTCGCCGCCTTCCGCCACTTCCCGTGGGTCCACGTCCCCGCCTACATCGCCGCCCAGGTTTCGGCCTCCATCTGCGCCTCCTTTGCTCTCAAGGGCATCTTCAATCCTTACGAGTCCGGAGGCGTTACCATTCCTTCTGTGAGCACCACCGTTGGCCAGGCTTTTGCGCTCGAGTTCATCATCACTTTTAATCTTCTCTTCGTCGTCACTGCTGTTGCCACCGATACTCGTGCAGTTGGGGAATTGGCCGGAATTGCTGTTGGAGCCACAGTTTTGCTCAACATTCTGATATCTGGGCCGGCAAGTGGCGGTTCAATGAACCCGGTTCGCACCTTGGGTCCCGCCGTGGCTGCAGGAAATTTCAAGCACCTATGGATATATATGATCGCTCCCACCCTCGGAGCTCTGGCCGGTGCTGGTGTTTATACTATCGTCAAGCTCCGCAGCGACGAGGCTGAGCAGCCACGCCAGGTTCGGAGCTTCCGTCGCTAG 885 0.5898 MADTEMGTPTAASAPATLGTPAPLFSSLHVDSLTYERNAMPMCHCLPTKAHTCFADFSVPNVSLTRKIGAEFVGTFLLMFAASAGPILNEKYNGAESLTGNAACAGLGVMIVILSTGHISGAHLNPSLTIAFAAFRHFPWVHVPAYIAAQVSASICASFALKGIFNPYESGGVTIPSVSTTVGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNFKHLWIYMIAPTLGALAGAGVYTIVKLRSDEAEQPRQVRSFRR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2354 294 PANTHER AQUAPORIN NIP2-1 57 282 IPR034294 -
Prci14g2354 294 Pfam Major intrinsic protein 61 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 ProSitePatterns MIP family signature. 123 131 IPR022357 -
Prci14g2354 294 FunFam Aquaporin NIP2-1 54 288 - -
Prci14g2354 294 SUPERFAMILY Aquaporin-like 62 284 IPR023271 -
Prci14g2354 294 Gene3D Glycerol uptake facilitator protein. 48 290 IPR023271 -
Prci14g2354 294 CDD MIP 66 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 105 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 66 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 188 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci14g2354 294 PRINTS Major intrinsic protein family signature 142 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2354 Prci-Chr14 30328667 30333847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2354 24 294 Major Intrinsic Protein MIP AT4G10380 73.022 7.60e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2354 K09874 - apan:127258234 471.47