Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2324 ATGGATCCTCATGAAGAGTTGCCTCAATACATTCATATAACGCAGAATGAATTTTTGAATAGACGACACGTGAAGCAGAAAGAGGAGGATATGGCAATATGTGAATGTAAATATAATGCTAGTGACCCTGATAGTGCATGTGGGGATGGGTGTCTTAACGTATTGACCAGCTCTGAATGCACCCCTGGCTATTGCCCTTGTGGTGTCTTTTGCAAAAATCAGAGATTTCAAAAGTGTGAATATGCAAAGACAAAGTTGTTTAAAACTGAAGGCCGGGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCTGGCCAATTTATCATTGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAAAGAAGATCCCAGGCTTATGAAATTCAAGGTCTCAAAGATGCATTTATTATTTGTCTTAATGCCTCTGAATCTATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAACGTCTTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGCTGAATTGGCATATGATTATAATTTTGAATGGTTTGGTGGTGCAAAGGTTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACATATTTGTGGGAAGATGATGATGAAAGGTATACTGTTGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAGCCTCCCTTAAAGGTCCTTAGAAACTTAAATCCTGACGTTCCTGGGATGCAAGTTAATGGAAAGACTGAACACTCCATGGACGTTATTATAAAAGCCGAACAATTATCAGGGTCAACTGCTTTTGGCATTCAGCCGCATGGATCAGTTTCAACAATGGGTTTACATGTCAATTCGATAAAATCTGAAATAGAAAATGATGATATGAAATTGTACTCTAGAGATACTCAGCAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAGTAATACTGCAGGCCGAAACTATCACATTGGACCTAGGTCCATGTCTGCCAAAAGATCAAAGAAATATAACGGAAGGTTTAAAAATATCACACAGAAGCAAGTCGATGTGAAGTCTGCTGCTGAATCTTTAGCATCTAAAGAAGCACAAGAGGAGATTTTAAAATACGAGGAAATGAAGAATGAGGCAACTGGTGCTCTTGATACCTTATACAATGAAATACGACCAGCCATCGAAGAACATGAGAGGGATAGTCAAGACAGTGTATCCACTAGTGTAGCAGAGAAGTGGATTGAAGCTTGCTGTTTGAAAATGAAGGCAGAGTTTGACCTTTACTCTTCCATTGTCAAGAATTTTGCTTGCGCTCCCGCCCAAGCCTCGTGGCCTTCCAAAACCTTCTCAAGTTGA 1446 0.3997 MDPHEELPQYIHITQNEFLNRRHVKQKEEDMAICECKYNASDPDSACGDGCLNVLTSSECTPGYCPCGVFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRSQAYEIQGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGAKVRCLCGAAKCSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPLKVLRNLNPDVPGMQVNGKTEHSMDVIIKAEQLSGSTAFGIQPHGSVSTMGLHVNSIKSEIENDDMKLYSRDTQQAFPQNNAMISRIRSNTAGRNYHIGPRSMSAKRSKKYNGRFKNITQKQVDVKSAAESLASKEAQEEILKYEEMKNEATGALDTLYNEIRPAIEEHERDSQDSVSTSVAEKWIEACCLKMKAEFDLYSSIVKNFACAPAQASWPSKTFSS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2324 481 ProSiteProfiles Post-SET domain profile. 206 222 IPR003616 -
Prci14g2324 481 Gene3D SET domain 1 236 IPR046341 -
Prci14g2324 481 FunFam Histone-lysine N-methyltransferase 1 234 - -
Prci14g2324 481 ProSiteProfiles SET domain profile. 82 199 IPR001214 GO:0005515
Prci14g2324 481 SUPERFAMILY SET domain 7 219 IPR046341 -
Prci14g2324 481 PANTHER SET DOMAIN PROTEINS 7 447 - -
Prci14g2324 481 Pfam AWS domain 42 79 IPR006560 GO:0005634|GO:0042054
Prci14g2324 481 ProSiteProfiles AWS domain profile. 29 80 IPR006560 GO:0005634|GO:0042054
Prci14g2324 481 SMART set_7 82 205 IPR001214 GO:0005515
Prci14g2324 481 SMART shorttest3 29 81 IPR006560 GO:0005634|GO:0042054
Prci14g2324 481 Coils Coil 392 412 - -
Prci14g2324 481 SMART PostSET_3 206 222 IPR003616 -
Prci14g2324 481 Pfam SET domain 93 199 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2324 Prci-Chr14 30159183 30165563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2324 64 221 C2H2 Transcription Factor Family AT2G23740 34.254 5.07e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci14g2324 SET 5.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2324 - - lang:109335575 768.459