Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2322 ATGGCAATATGTGAATGTAAATATAATGCTAGTGACCCTGATAGTGCATGTGGGGATGGGTGTCTTAACGTATTGACCAGCTCTGAATGCACCCCTGGCTATTGCCCTTGTGGTGTCTTTTGCAAAAATCAGAGATTTCAAAAGTGTGAATATGCAAAGACAAAGTTGTTTAAAACTGAAGGCCGGGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCTGGCCAATTTATCATTGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAAAGAAGATCCCAGGCTTATGAAATTCAAGGTCTCAAAGATGCATTTATTATTTGTCTTAATGCCTCTGAATCTATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAACGTCTTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGCTGAATTGGCATATGATTATAATTTTGAATGGTTTGGTGGTGCAAAGGTTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACATATTTGTGGGAAGATGATGATGAAAGGTATACTGTTGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAGCCTCCCTTAAAGGTCCTTAGAAACTTAAATCCTGACGTTCCTGGGATGCAAGTTAATGGAAAGACTGAACACTCCATGGACGTTATTATAAAAGCCGAACAATTATCAGGGTCAACTGCTTTTGGCATTCAGCCGCATGGATCAGTTTCAACAATGGGTTTACATGTCAATTCGATAAAATCTGAAATAGAAAATGATGATATGAAATTGTACTCTAGAGATACTCAGCAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAGTAATACTGCAGGCCGAAACTATCACATTGGACCTAGGTCCATGTCTGCCAAAAGATCAAAGAAATATAACGGAAGGTTTAAAAATATCACACAGAAGCAAGTCGATGTGAAGTCTGCTGCTGAATCTTTAGCATCTAAAGAAGCACAAGAGGAGATTTTAAAATACGAGGAAATGAAGAATGAGGCAACTGGTGCTCTTGATACCTTATACAATGAAATACGACCAGCCATCGAAGAACATGAGAGGGATAGTCAAGACAGTGTATCCACTAGTGTAGCAGAGAAGTGGATTGAAGCTTGCTGTTTGAAAATGAAGGCAGAGTTTGACCTTTACTCTTCCATTGTCAAGAATTTTGCTTGCGCTCCCGCCCAAGCCTCGTGGCCTTCCAAAACCTTCTCAAGTTGA 1356 0.4004 MAICECKYNASDPDSACGDGCLNVLTSSECTPGYCPCGVFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRSQAYEIQGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGAKVRCLCGAAKCSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPLKVLRNLNPDVPGMQVNGKTEHSMDVIIKAEQLSGSTAFGIQPHGSVSTMGLHVNSIKSEIENDDMKLYSRDTQQAFPQNNAMISRIRSNTAGRNYHIGPRSMSAKRSKKYNGRFKNITQKQVDVKSAAESLASKEAQEEILKYEEMKNEATGALDTLYNEIRPAIEEHERDSQDSVSTSVAEKWIEACCLKMKAEFDLYSSIVKNFACAPAQASWPSKTFSS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2322 451 FunFam Histone-lysine N-methyltransferase 1 204 - -
Prci14g2322 451 Coils Coil 362 382 - -
Prci14g2322 451 SUPERFAMILY SET domain 3 189 IPR046341 -
Prci14g2322 451 Gene3D SET domain 1 206 IPR046341 -
Prci14g2322 451 PANTHER SET DOMAIN PROTEINS 3 417 - -
Prci14g2322 451 SMART PostSET_3 176 192 IPR003616 -
Prci14g2322 451 Pfam AWS domain 12 49 IPR006560 GO:0005634|GO:0042054
Prci14g2322 451 SMART set_7 52 175 IPR001214 GO:0005515
Prci14g2322 451 ProSiteProfiles AWS domain profile. 1 50 IPR006560 GO:0005634|GO:0042054
Prci14g2322 451 Pfam SET domain 63 169 IPR001214 GO:0005515
Prci14g2322 451 SMART shorttest3 3 51 IPR006560 GO:0005634|GO:0042054
Prci14g2322 451 ProSiteProfiles SET domain profile. 52 169 IPR001214 GO:0005515
Prci14g2322 451 ProSiteProfiles Post-SET domain profile. 176 192 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2322 Prci-Chr14 30158560 30165563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2322 34 191 C2H2 Transcription Factor Family AT2G23740 34.254 3.11e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci14g2322 SET 5.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2322 - - lang:109335575 717.613