Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2315 AGAAGCGGTATTTACATATGCTTGCTAACGGTGGCGCACCATCGAGGATCAGGCGAGTTCGTGAGATTCACGGCAGAACAAGGCGGCGGCGAGGGAAATACTGACCACCGGCAGTCGCAGTCGGTACGATTCAACGAAGCTGAAGAGTTGGCAATAACGACGACAACGGCGGAACCCGTGGAGCCTGTGGTGTCAGGGTATGGCAGAGCCGGAGAGTTGTCGGCAATGGTTTCGGCGCTGACGCATGTGGTGGCGTCAGGTTCTTCTGGACAGAGAGACACTAATGAATGGATCCAAGGAATCAGTGGGTTTCCTGTCATGTCATCTTTTGGCCATGTTTCATCTCCTCGTTTGTCTCCTTCTTCCTCTTCCTCACGTACAGTTATGGGCTCTGCCTCTGGTTCATGGGTGCGTCAGAAAAGAGGCCGACAAGAAGAAGAAGAAGCCGCATACAAAGCAGCCATTGGTGACTTCGCTGCACCATTACAGAACGAGTCGGCATTATCATCAGCAGTGACTGAGGTGGAAGCTTCGAATATCGCTAATACTGATGGGGCGGCGGCGGCGGCTGCCGTGGCGTTACCGGTGATGCCATCAGGTGAAATTGGTTCGTTTGAAGAAACAGGGGAAAGGAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCGGCGGAGATTCGCGATCCCCACAAGGCAGCGAGGGTTTGGCTTGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGCAGCAGAGCCAAACTAAACTTTCCGGAAAATGTCAGAGCAGTTCCTGTGCCCGTTCAAAATGTTCCGGCCACCAGCCAAGTTCTCCAGCAGTACCCGGCGGCGCTTCCGTTCATGCAGGTTCCGTTTTTTCAGGGACCCTCTGATTCGGTCAGAGACTTTTGGAATTACTCCCAGCTGCTACAGAGCTCCGGCGACTTCCAAGGTCAAATGCAGCCTCAGCCGCCGCAGCAGATACCCCCGGGTTTGGTACAGCAATGGCTGCATAATTCTCAATTGAATGTTCTTCAATCGTCTTCTTCGTTGTTATCGCCAGCATCTTTGTCGTCTTCTTCATCTCCCACGGTATTTTCGCCTTCTAGTCAGTCGTCGTCTGCTTCATTCCCCCTGCTTTCTAATCAGCAAATGGGCTATTTCCGACCACCGGGAAACCAGACTCACGGCGGGGCCATATCATATTTTCCGGCGTCAACATGGTCAGAAACCATTAACTTTCCTCCGCCGTCGTCTAGGGCGACTCTTTTCTTCCCTCCCCACTAA 1326 0.5392 RSGIYICLLTVAHHRGSGEFVRFTAEQGGGEGNTDHRQSQSVRFNEAEELAITTTTAEPVEPVVSGYGRAGELSAMVSALTHVVASGSSGQRDTNEWIQGISGFPVMSSFGHVSSPRLSPSSSSSRTVMGSASGSWVRQKRGRQEEEEAAYKAAIGDFAAPLQNESALSSAVTEVEASNIANTDGAAAAAAVALPVMPSGEIGSFEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPVQNVPATSQVLQQYPAALPFMQVPFFQGPSDSVRDFWNYSQLLQSSGDFQGQMQPQPPQQIPPGLVQQWLHNSQLNVLQSSSSLLSPASLSSSSSPTVFSPSSQSSSASFPLLSNQQMGYFRPPGNQTHGGAISYFPASTWSETINFPPPSSRATLFFPPH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2315 441 Gene3D AP2/ERF domain 213 273 IPR036955 GO:0003700|GO:0006355
Prci14g2315 441 Pfam AP2 domain 214 263 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 SUPERFAMILY DNA-binding domain 214 272 IPR016177 GO:0003677
Prci14g2315 441 MobiDBLite consensus disorder prediction 115 143 - -
Prci14g2315 441 ProSiteProfiles AP2/ERF domain profile. 214 271 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 MobiDBLite consensus disorder prediction 115 138 - -
Prci14g2315 441 PRINTS Ethylene responsive element binding protein signature 237 253 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 PRINTS Ethylene responsive element binding protein signature 215 226 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 CDD AP2 222 273 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 SMART rav1_2 214 277 IPR001471 GO:0003700|GO:0006355
Prci14g2315 441 FunFam Ethylene-responsive transcription factor 2 213 272 - -
Prci14g2315 441 PANTHER DNA-BINDING DOMAIN 173 369 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2315 Prci-Chr14 30139197 30142259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2315 206 289 AP2-EREBP Transcription Factor Family AT2G33710 70.238 2.08e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g2315 AP2 9.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2315 - - pcin:129292679 714.531