Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2279 ATGGACCCCAAGTTCGTCGGAAAGCCGCCCATCACGGTGGACCTCGAGCAGATGCCTGACGCCCCACAGCGTGGGTCCTACCACCGTAGGGCCCACTCCGACACCTCCTTCCGCATCGCCAACTTCGACGAGCTCCTCCTCTTCGACCCGTCAGACCTCGATATCTCCAACCTTCCTTCGCCGGCGCTGCCCAACTCCACCTCCACCAACGCCTCGCCTTTCTCCGCTGCTGCTGCGGCACCCCACAGCGACATGCCCATGGATTTGGTCTCGAAGCCGTCGGAGGAATCCAACGGCAGGAATTCACGGTCCAGGACCGCTGGTTCCCCTGTTGGTCATATCCGGAGCTTGTCAATGGACTCTGATTTTTTCAACGGCCTGGGATTGACTGGTGGTGTTGATGGCGACAAACTTGGCGGGAAAGGTGTGGAGGAGAGAAGAGGGGGTCATCACAGGCACAGCAATTCCATGGATGGGTCATCGTCTTTGTCTTTCGAGGCCGACTCTTCCATGGCCATCGACGGTGTGAAGAAGGCCATGGCTCCCGATAAGCTCGCTGAACTTGCTCTCGTTGATCCCAAGAGAGCTCGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGAAAAATTCGGTATACAAATGAGCTGGAAAGGAAGGTACAGACGCTTCAAAATGAAGCAACTAACCTCTCTGCTCAGGTTACTATGCTTCAGAGAGACACTACAGGGTTGACTAATGAGAACAAGGAGCTTAAACTGCGCTTAGAGGCTATGGAACAACAAGCACAGCTTAGAGATGCTCTGAATGAAGCATTGAAGGAAGAACTACAGCGCCTGAAGCTACAAAGTAGTCAAATTGCTGCCATGAATGGCAACCCTTCTTATGGTGGGTTTCTCTCTCAATTTGCTTCTCAGTTAGCCTTGCAACATCTTGCAAATCCTCCATCCCAGCAGGCACAACAGCAATCACAGGTCAGCATGCCTCCGTCATCCGCTGAACAGCCTTTCAACGGGCAGCCTGGCCCGGACTTCTTGGATTTCAATGGCAAGAACTAG 1068 0.5346 MDPKFVGKPPITVDLEQMPDAPQRGSYHRRAHSDTSFRIANFDELLLFDPSDLDISNLPSPALPNSTSTNASPFSAAAAAPHSDMPMDLVSKPSEESNGRNSRSRTAGSPVGHIRSLSMDSDFFNGLGLTGGVDGDKLGGKGVEERRGGHHRHSNSMDGSSSLSFEADSSMAIDGVKKAMAPDKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQNEATNLSAQVTMLQRDTTGLTNENKELKLRLEAMEQQAQLRDALNEALKEELQRLKLQSSQIAAMNGNPSYGGFLSQFASQLALQHLANPPSQQAQQQSQVSMPPSSAEQPFNGQPGPDFLDFNGKN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2279 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Prci14g2279 355 MobiDBLite consensus disorder prediction 94 111 - -
Prci14g2279 355 SUPERFAMILY Leucine zipper domain 194 249 IPR046347 GO:0003700|GO:0006355
Prci14g2279 355 MobiDBLite consensus disorder prediction 138 154 - -
Prci14g2279 355 Gene3D - 193 246 - -
Prci14g2279 355 Pfam Basic region leucine zipper 192 243 IPR004827 GO:0003700|GO:0006355
Prci14g2279 355 MobiDBLite consensus disorder prediction 134 163 - -
Prci14g2279 355 MobiDBLite consensus disorder prediction 314 341 - -
Prci14g2279 355 MobiDBLite consensus disorder prediction 1 31 - -
Prci14g2279 355 Coils Coil 210 293 - -
Prci14g2279 355 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 333 - -
Prci14g2279 355 CDD bZIP_plant_RF2 195 244 IPR044759 GO:0003700|GO:0006355
Prci14g2279 355 MobiDBLite consensus disorder prediction 314 355 - -
Prci14g2279 355 FunFam Transcription factor VIP1 193 246 - -
Prci14g2279 355 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Prci14g2279 355 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2279 Prci-Chr14 29907237 29911533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2279 11 332 bZIP Transcription Factor Family AT1G43700 49.855 2.76e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci14g2279 bZIP_2 3.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2279 K20557 - qsa:O6P43_004198 392.889