Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2275 ATGGGTAGAAAGAAGCCGACCGCCCGTGACGATGACAACGCGCCCGCTGCATCTCAAGGCGGTGGAAAGTCGAAAAAGAAGGGGCTAGTGATCGATGATGATGAGTATTCTATTGGAACGGAGCCCTCTGAGGAACCTCCGGCTCAAGAAGAGAAACCTGCGGCGACGGGAAAGAAGAAAGGTAAAAAGGGTAACTCAAAGGCTTCAGAAGCCGAGCACGAAGATTTAGAGAAGGCGATGGATGATGATGATGATGTACCTGAAGTTGTGTTTACTGGGAAGAAGAAGGGAAAATCAAAAAAAGGTGGTGGAAACAGTGTGTTTACTGCTTCGAGCTTCGGTTTGCTTGGTGATGAGGAGGGTGGAGGGGATGATGAAGATAAACAATCCGACATAGCTGGTGAGGTAGGCAATGATGACGAAGATGAACCGGTTGTTACTTTTTCAGGGAAGAAGAAATCTTCAAAGGTTTCCAAGAAGAAGGGTGGTAGCTTGTTCACCGCATCAGCTTTTGATATTATAGATGAAGATAATGAAGAGGAGGTGATTGATGATTCAGTGGAAGCCAGCCGCGAAGAGAATGATGACATGGAAGAGCCGGTTATTGCTTTTACGGGTAAGAAAAAATCATCAAAAAGTAGCAAGAAGGCTGGTGCCTTATTCACAGGATCTAGTTTCGGTAATACTAACGGAGAGCAGGACAAAAAGGAGCAAGAAGATGAGGATGAAGATGTTGCTCCGATCACTTTCACAGGGAAGAAGAAGAAGTCATCCAAATCTTTGAAGAAGGCTGTTAATACATTTAGTGCAGCTGTTGCTGAAGAGGATGTGGATGATGATGATTTTGTGCTCGAGTCTACTATAGCTGATGAAGATAAGGTTGAGGACGAAGATGTTTCTATTATTACGTTTTCAGGTAAAAAGAAGTCTTCTAAGAGAAACAAGACTGCTACTACCAAAGCTAGTGATGATTTTGAATCTGTTAATGAAAGTCAAGTTGCTGTAGAGCCTGGGCAACCTAGCGTAATAGACAACAATAAAGGTAATAAGAGTGAAGAGGTGATTGAAACTTCAAAAAATAAAAAGAAGAAGAATAAAAAGAGTGGAAGAACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGGCCTCCAGTAAAACCTGCTTCCCCTCCAACAGAGGATGATAAAGTTCAGGCTTCTTCTGAAGTGGCTGTTCCTGCTACTGCTGCGGTGGAAAAAGAAGGGGAAGAAGAGACAATTGAGTCAGCTGCTGCAAAAAAGAAGAAGAAGAATAAAAAGAGTGGAAGAACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCTGAACTTGGAGAGGGGCCTCCAGTAAAGCCTGCCCTCCCTCCTGCAGAGAAGGATAAAGTTCAGGCTTCTTCTGAAGTAGCTGCCCCTGCTGCTGCTGTGGTGGAAAAAGAAGGGGAAGAAGAGACAATGGAGTCAGCTGCTGTAAAAAAGAAGAAAAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCTGCTGCAGCAGCTGCGGCTGCAAGTGCCCCAGATAATGAGAAGAATGAAGAAGTTAAACCCGAGATCTCAGAATCAAAGAAGAATGATTCCAAGAGTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCATTGGCCCGAAGAAAAGAGGCTGAAGAGAGGAAGAAAAGGGAAGAGGAGGAGAGGCTGAGGAAGGAAGAAGAAGAGCGGCGTAGGCAAGAGGAGCTTGAGAGACAAGCAGAAGAGGCAAGACGTAGAAAAAAGGAAAGGGAGAAGGAGAAGCTCCAGAAGAAGAAGCAAGAAGGCAAATTATTAACTGGTAAGCAAAAGGAAGAAGCTCGTCGCTTGGAGGCCATGAGGAAGCAGTTTCTTGCTGGTACAGGGGGTGTCACTCTTCCTACTGGGGACTCGGGTGTACCAGCAAAACGACCCATATATCAGACAAAGAAGTCAAAACAAGCCCATCATCAGCAGAATGGCACTGCCCCTGTTAAGGCAGCTGAAGATGTGGAAGCAAAGGAAAATCTGGAGACCACCCCTGATGCAGAGTCATTGGAACCAGAGAAGGATGAAGTGGTTGAATCAGTGCAGGATGAGGACAACGTTAAACCTTCTGAAGATGTTGAAGAAGATGAAGTTGAAGAAGATGATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAAGTGCATTTGCTGATGAGGAGGCTGACTCAGAACCTGAACCTGTAGTGAAAAAGGAGATAAAAAATGCTGTATCAACTCAAAATGCTGCACCTCTGTCTGTTGTCAAGTCAACAGGCACAACTAAGAAAGCTGCTTCTACCGAGCAAATTGAAAGTAAAATGCAGGTTGAGAAGCAACCACCTAAGCAGGTTCAGAAGCAACCAGCTAAGCAGACTGGGTTGCAACCACCCAATTCAGCTGTGCCTTCTCAGCCAAGTGGAGAGAACCTTCGTTCCCCAATTTGCTGTATTATGGGCCATGTGGACACAGGTAAAACTAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGTGGCATCACACAGCAGATTGGCGCTACATATTTTCCTGCTGAGAACATACGTGAAAGAACAAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCAGGTCTGCTGGTGATAGATACCCCTGGGCATGAGTCTTTTACTAACTTAAGGTCAAGGGGTTCAGGTCTATGTGATATTGCAATTTTAGTTGTCGACATTATGCACGGATTAGAACCTCAGACAATAGAATCACTCAATCTGTTGAAAATGAGGAATACGGAATTCATTGTTGCGTTGAACAAAGTTGACAGACTTTATGGTTGGAAAGTATGCCGTAATTCTCCAATTGTTAAGGCAATGAAGCAGCAAACCAAGGATGTACAAAATGAGTTCAATATGAGAGTGACTCAGATCATCACTCAATTCAAGGAACAGGGGCTAAACAGTGAGTTATACTATAAAAACAAAGAAATGGGAGAAACCTTCAGTATTGTACCTACTAGTGCTATAAGCGGTGAAGGTATCCCAGATTTGTTATTGTTGTTGGTCCAATGGACACAAAAAACAATGGCTCAGAAACTTACGTATAGTGATGAAGTGCAGTGTACAGTCTTGGAGGTTAAGGTTGTTGAAGGTCATGGGACAACGATTGACGTTGTCTTGGTTAACGGCGTTCTTCATGAAGGAGATCAAATAGTTGTGTGTGGAATGCAGGGACCTATTGTTACTACAATTCGAGCTCTATTGACACCTCATCCTATGAAAGAGCTCCGTGTTAAGGGCACATACCTCCATCATAAAGAAATTAAGGCTGCTATGGGTATCAAAATCACTGCTCAGGGGCTTGAGCATGCTATTGCTGGCACTGCTTTATACGTGGTGAAGCCTGAGGATGATTTAGAAGATATCAAAGAAGCAGCTATGGAAGATATGGAGTCAGTCATGAACAGGATTGACAAGAGTGGTGAGGGAGTTTGTGTACAGGCATCCACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCGGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAAGACGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTTTGCCACTATCTTGGCATTTGATGTCAAAGTCAATCAGGAGGCTAAAGATCTTGCAGAAGAACTAGGTGTGAAAATCTTTATGGCTGATATCATTTATCACCTATTTGACCAATTTAAGGCCTATATTGACAACATTAAGGAGGAAAAGAAGAAAGAATCAGCTGATGAGGCAGTCTTCCCTTGTGTCCTGAAAATCTTACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATATTCTTGAAGGCGTATTAAAGGTTGGGACTCCAATTTGTGTTCCTTCCAGAGATTACATAGATATTGGTCGCATTGCATCCATTGAAAATAACCATAAACCTGTTGATTATGCCAAGAAAGGGCAGAAAGTAGCCATCAAGATTGCTGGCAGCAACCCTGAGGAACAACAAAAAATGTATGGGAGGCATTTCGAGATTGATGATGAACTTGTAAGCCATATCTCAAGGAGATCTATCGATATCCTCAAAGCTAATTATCGGGATGAACTGAGCATGGAGGAATGGAGGCTTGTTGCAAAATTGAAGAACGTTTTCAAGATACAGTGA 4320 0.4315 MGRKKPTARDDDNAPAASQGGGKSKKKGLVIDDDEYSIGTEPSEEPPAQEEKPAATGKKKGKKGNSKASEAEHEDLEKAMDDDDDVPEVVFTGKKKGKSKKGGGNSVFTASSFGLLGDEEGGGDDEDKQSDIAGEVGNDDEDEPVVTFSGKKKSSKVSKKKGGSLFTASAFDIIDEDNEEEVIDDSVEASREENDDMEEPVIAFTGKKKSSKSSKKAGALFTGSSFGNTNGEQDKKEQEDEDEDVAPITFTGKKKKSSKSLKKAVNTFSAAVAEEDVDDDDFVLESTIADEDKVEDEDVSIITFSGKKKSSKRNKTATTKASDDFESVNESQVAVEPGQPSVIDNNKGNKSEEVIETSKNKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKPASPPTEDDKVQASSEVAVPATAAVEKEGEEETIESAAAKKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKPALPPAEKDKVQASSEVAAPAAAVVEKEGEEETMESAAVKKKKKKKEKEKEKKAAAAAAAASAPDNEKNEEVKPEISESKKNDSKSKAADKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLAGTGGVTLPTGDSGVPAKRPIYQTKKSKQAHHQQNGTAPVKAAEDVEAKENLETTPDAESLEPEKDEVVESVQDEDNVKPSEDVEEDEVEEDDEDEWDAKSWDDVNLNGKSAFADEEADSEPEPVVKKEIKNAVSTQNAAPLSVVKSTGTTKKAASTEQIESKMQVEKQPPKQVQKQPAKQTGLQPPNSAVPSQPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKVCRNSPIVKAMKQQTKDVQNEFNMRVTQIITQFKEQGLNSELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMAQKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTALYVVKPEDDLEDIKEAAMEDMESVMNRIDKSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREFATILAFDVKVNQEAKDLAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKESADEAVFPCVLKILPNCIFNKKDPIVLGVDILEGVLKVGTPICVPSRDYIDIGRIASIENNHKPVDYAKKGQKVAIKIAGSNPEEQQKMYGRHFEIDDELVSHISRRSIDILKANYRDELSMEEWRLVAKLKNVFKIQ 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2275 1439 SUPERFAMILY Translation proteins 1306 1438 IPR009000 -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 489 506 - -
Prci14g2275 1439 CDD aeIF5B_II 1071 1181 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 177 195 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 321 348 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 726 747 - -
Prci14g2275 1439 FunFam Eukaryotic translation initiation factor 5B 1189 1295 - -
Prci14g2275 1439 Coils Coil 1169 1189 - -
Prci14g2275 1439 Coils Coil 557 628 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 45 75 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 417 431 - -
Prci14g2275 1439 Pfam Translation-initiation factor 2 1175 1288 IPR023115 -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 440 455 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 215 231 - -
Prci14g2275 1439 Pfam Elongation factor Tu domain 2 1086 1164 IPR004161 GO:0005525
Prci14g2275 1439 Gene3D - 842 1069 IPR027417 -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 368 383 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 304 779 - -
Prci14g2275 1439 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 847 1065 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 PRINTS GTP-binding elongation factor signature 915 925 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 PRINTS GTP-binding elongation factor signature 851 864 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 PRINTS GTP-binding elongation factor signature 967 976 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 PRINTS GTP-binding elongation factor signature 931 942 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 MobiDBLite consensus disorder prediction 761 775 - -
Prci14g2275 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 1138 IPR027417 -
Prci14g2275 1439 Coils Coil 419 439 - -
Prci14g2275 1439 Gene3D Translation factors 1302 1439 - -
Prci14g2275 1439 Gene3D - 1191 1295 IPR036925 -
Prci14g2275 1439 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 505 1435 IPR015760 -
Prci14g2275 1439 FunFam Eukaryotic translation initiation factor 5B 841 1069 - -
Prci14g2275 1439 FunFam eukaryotic translation initiation factor 5B 1070 1189 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 1 159 - -
Prci14g2275 1439 Gene3D Translation factors 1070 1190 - -
Prci14g2275 1439 CDD IF2_aeIF5B_IV 1310 1405 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 530 642 - -
Prci14g2275 1439 FunFam Eukaryotic translation initiation factor 5B 1302 1439 - -
Prci14g2275 1439 CDD IF2_eIF5B 850 1060 - -
Prci14g2275 1439 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1172 1301 IPR036925 -
Prci14g2275 1439 Pfam Elongation factor Tu GTP binding domain 851 1059 IPR000795 GO:0003924|GO:0005525
Prci14g2275 1439 MobiDBLite consensus disorder prediction 177 261 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 690 725 - -
Prci14g2275 1439 MobiDBLite consensus disorder prediction 792 845 - -
Prci14g2275 1439 NCBIfam small GTP-binding protein domain 852 976 IPR005225 GO:0005525
Prci14g2275 1439 Coils Coil 491 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2275 Prci-Chr14 29871962 29886060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2275 1 174 Eukaryotic Initiation Factors Gene Family AT1G76810 45.355 6.83e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2275 K03243 - gmx:100814875 1583.54