Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2270 ATGCTGGGGGACTCAACTGCTTTAGGAGGTGGGGGAGCTAGCTCTGGAGAAGATGCGGCCGTTGCTGCTGCATCTGCTGGAGGAGTTGCAGAAGCCCATGACTGTGGCGAGTCAGCAATTGCGGCGGCGGGTGGCGGTGGATCGAATTCAGGCGAAGAGGGGGGTGGTGGTGGTGGTGGTGGTGACAGAAGCTTCGGCGGTAACCGTTGGCCCCGCCAGGAGACTCTGGCGCTCTTGAAGATACGCTCCGACATGGACGTGGCGTTTCGAGATGCCAGCGTTAAGGGTCCCTTGTGGGATGAAGTTTCCAGGAAGCTAGCGGAGCTTGGATACCACAGAAGCGCCAAGAAGTGCAAGGAGAAGTTCGAGAACGTTTACAAGTACCACAAGCGAACCAAGGAAGGCCGGACCGGAAAACCGTACGGCAAAACCTACCGTTTCTTCGATCAGTTGGAAGCTCTCGATCAGCACCATAGCCACCCTCATCATAATAACAATTCTTTATTGATTCAATCCTCTTCTTCTAATTCCGCTCCTCTACCTGCACCACCGGTCTCCGTCATAGCCGCCGCCACCCAACCTCCTCCTTCAATAATGGTGGCCCCGCAAGTCACGCCTCATGCTCCTCCTCCTCCTCATGCTAATGCCAGTACTGTTCCATCAATGAACACTTCAATCCCTCCATTTTACCCGCCACCAGCACCGGCATCAGCAACGACGATAACAGCAAACCCTACTTTTATACCCCCGTTCACGAGTATCCCCACGGATCTCTTGTCCAATTCTAGTTCGTCTTCGACGTCGTCAGACGAGACAATAGAGGCTCGGCGGAAGCGGAAGCGGAAGTGGAAGGACTTCTTTGAGAGGTTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTGCAGAAGAAGTTTCTGGAAGCCATAGAGAAACGCGAGCACGAACGCATGGCTCGAGAAGAATCCTGGAGAATGCAGGAGATGGCCAGGATCAACAAGGAGAGAGAAATATTGGCCCAGGAAAGATCCATCGCGGCGGCGAAAGACGCTGCTGTAATGGCCTTCTTGCAGAAGATCGCTGAACAGCAGAATCTCGGCCAACCGGCACCGCCAACAAATAACATTGACATCCCCAATCCTCCGTTGCAACCCACAGCAGCTCCCACACCACAACCAGCACCTGTCGTTGCTCCGCCGCAGCAGCCACTGCAACCTGTGACGGTGCAACAATCAACCCCACTTCTTTCTACTCCACCGCCTCCGCCATCCACCCAACAGGGAATAATAAGCATGGAAATTGTAAAGAAAAATGACAATGGGGAGAACAGTAATTTGACGATGCCATCCTCGGCCTCATCATCGAGGTGGCCGAAGACGGAAGTGGATACTCTGATAAAACTACGGACAAACCTGGACGCGAAGTACCAGGAGAATGGGCCGAAGGGGCCGTTGTGGGAGGAAATCTCCGCTGCAATGAGGAGACTGGGATACAACCGTAGCTCGAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAAAGACCAGAAGATTCCAAGACGTGCCCGTACTTCCACCAGCTGGATGCTTTATACAGGGAGAAGAATTTCAAGATGCAGACAGCAATGCCGCCGCCGGAGAACATGATGTCTACGCCGCTCATGGTGCGCCCAGAGCAGCAGTGGCCGCCGCAGCCTCAGCAGCAAGATGCGCGGTCGTCGGGGCCCCAGGTGATGATAGGAAGCGCGGGAAATGATGCAATGGAAGTAGACGAAGAGGAGGATGACAAGGATAGGGAAGAGCAAGAAGACGAGGACGATGATGGAGGAAGTGGTACCTTCGAGATAGTGGCAAGCAAGCCAGCTACTTCAGTGGGTGCTTCTGAGTGA 1920 0.5385 MLGDSTALGGGGASSGEDAAVAAASAGGVAEAHDCGESAIAAAGGGGSNSGEEGGGGGGGGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKPYGKTYRFFDQLEALDQHHSHPHHNNNSLLIQSSSSNSAPLPAPPVSVIAAATQPPPSIMVAPQVTPHAPPPPHANASTVPSMNTSIPPFYPPPAPASATTITANPTFIPPFTSIPTDLLSNSSSSSTSSDETIEARRKRKRKWKDFFERLMKEVIEKQEELQKKFLEAIEKREHERMAREESWRMQEMARINKEREILAQERSIAAAKDAAVMAFLQKIAEQQNLGQPAPPTNNIDIPNPPLQPTAAPTPQPAPVVAPPQQPLQPVTVQQSTPLLSTPPPPPSTQQGIISMEIVKKNDNGENSNLTMPSSASSSRWPKTEVDTLIKLRTNLDAKYQENGPKGPLWEEISAAMRRLGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNFKMQTAMPPPENMMSTPLMVRPEQQWPPQPQQQDARSSGPQVMIGSAGNDAMEVDEEEDDKDREEQEDEDDDGGSGTFEIVASKPATSVGASE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2270 639 Pfam Myb/SANT-like DNA-binding domain 68 154 IPR044822 -
Prci14g2270 639 Pfam Myb/SANT-like DNA-binding domain 454 541 IPR044822 -
Prci14g2270 639 MobiDBLite consensus disorder prediction 597 621 - -
Prci14g2270 639 CDD GT1 454 519 - -
Prci14g2270 639 CDD GT1 68 133 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 258 277 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 1 27 - -
Prci14g2270 639 SMART sant 66 128 IPR001005 -
Prci14g2270 639 SMART sant 452 514 IPR001005 -
Prci14g2270 639 MobiDBLite consensus disorder prediction 571 590 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 365 426 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 41 69 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 568 639 - -
Prci14g2270 639 FunFam Trihelix transcription factor GT-2 70 131 - -
Prci14g2270 639 ProSiteProfiles Myb-like domain profile. 448 512 IPR001005 -
Prci14g2270 639 PANTHER FI21293P1 47 593 - -
Prci14g2270 639 Gene3D - 70 131 - -
Prci14g2270 639 Gene3D - 456 517 - -
Prci14g2270 639 ProSiteProfiles Myb-like domain profile. 68 126 IPR001005 -
Prci14g2270 639 MobiDBLite consensus disorder prediction 373 401 - -
Prci14g2270 639 Coils Coil 284 311 - -
Prci14g2270 639 MobiDBLite consensus disorder prediction 438 457 - -
Prci14g2270 639 FunFam Trihelix transcription factor GT-2 456 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2270 Prci-Chr14 29819385 29822808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2270 62 572 Trihelix Transcription Factor Family AT1G76880 56.391 2.33e-170 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci14g2270 Myb_DNA-bind_4 7.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2270 - - pdul:117637144 563.148