Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2268 ATGCAGCTGGGAGATCCGAGTGTGTTAGAGACTCCCTCCGGCGAGGCCACGATGGCGGCCCCCGTGACAGCTACTGCACCGCCAGGAGCTGCGGCGTCGGACGGTCGTGCAGAAATCGAGATGATGAATAATATTGTTTGTACAGACGCAACAAATTGTGGAGATGATATTGATCATCAGAAGAGAAGTGTTGGTGGTGGAGGACAAGGAGGCAACCGGTGGCCTCGCCAAGAAACTTTTGCTCTGTTGAAGATAAGGTCAGATATGGACGCTTCGTTTCGGGATTCCAGTCTTAAAGGTCCACTTTGGGAACAAGTTTCAAGGAAAATGGCGGAACTTGGATATAGTCGAAGCGCGAAGAAGTGCAAAGAGAAGTTCGAGAACGTGTACAAGTACCACAAGAGGACCAAAGAAAGCAGAAGTGGTAAGCCAGAAGGCAAGACCTACAAATTCTTCGATCAATTACAAGCCCTTGAAAATAGATTCACTGTCTCTCACACTCCAAAACCACCTCCTCCTCCACCACAACCTTCTTTCCAAACATGGCCCAGCAATATTAATAATGATTCTACCGCAACCATCTCTTACGACGTCACTACTATTCCATCCACTATAAACCCTACTCTCATTTCCCCGCCGCCGCCGCCACTGGCGAATATTGGCTCTACCACCAGCACCAACCCTAGGAATTTGTCCAACAAGAGCCTCTTCTCATCTATCACGACCACCTCGACCTCGTCGTCCACCGCCTCCGACGAGGACATGGAAGATAAGTACAGGAAGAAGAGAAAGATGAAGGACTACTTCCGGAGGCTGACGAGGCAGGTGCTGGCCAAGCAGGAGGAGATGCAGAAGAGGTTTCTAGAAGCCATAGAGAAAAGAGAGCGCGAAAGAGAAACACAGTTAGAAGCTTGGATGGCTCAGGAAATGGCGAGGATCAATAGAGAGCATGACCTTCTAATCCAAGAAAGATCTACAGCGGCCGCCAAGGATGCCGCCACCATCACTTTCCTCCAGAAGTTATCCGGTGGCCAGCAAAATCCGGCACCACCGCATCCACCGGCCCCGCCGCAACCTGTAATGTGGCCAAAGGCAGAAGTTCATGCATTGATAAGGCTGAGGACGAGCATGGACCCAAAGTATCAAGAGAATGGACCAAAAGGACCACTATGGGAGGACATATCAGCTGGAATGCAGAGGCTAGGTTACAATAGGAGCTCCAAGAGATGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGCGAGGACAGCAAGACATGTCCTTACTTTCGTGAGCTCGATGCTCTTTACAGAGAGAAGAGCAAAACCAACAACAGTATCTTATTTGGCGCCGGAAATCCCAATATGATGATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCGCCTCCGCAGCACGCGGAGGAAGAGGGCGGTGCCGGGAGGGAAAATGCAAAGAATGTGGTTCAGTACGAAGCGAGAGAGAGAGAGGAAGAGGAGGAAGAGGAGGATGAGATGGATGAAGATGATGAAGTTTTGGAAGATGAAGATAGGATGGAGGATGATCAAGAACGACGTTATGAGGTTGCAGCGACAAGCAATAAAGTTCTTTCCGTGGATACTGTTGAATGA 1671 0.4985 MQLGDPSVLETPSGEATMAAPVTATAPPGAAASDGRAEIEMMNNIVCTDATNCGDDIDHQKRSVGGGGQGGNRWPRQETFALLKIRSDMDASFRDSSLKGPLWEQVSRKMAELGYSRSAKKCKEKFENVYKYHKRTKESRSGKPEGKTYKFFDQLQALENRFTVSHTPKPPPPPPQPSFQTWPSNINNDSTATISYDVTTIPSTINPTLISPPPPPLANIGSTTSTNPRNLSNKSLFSSITTTSTSSSTASDEDMEDKYRKKRKMKDYFRRLTRQVLAKQEEMQKRFLEAIEKRERERETQLEAWMAQEMARINREHDLLIQERSTAAAKDAATITFLQKLSGGQQNPAPPHPPAPPQPVMWPKAEVHALIRLRTSMDPKYQENGPKGPLWEDISAGMQRLGYNRSSKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFRELDALYREKSKTNNSILFGAGNPNMMMEPLMVQPEQQWRPPPQHAEEEGGAGRENAKNVVQYEAREREEEEEEEDEMDEDDEVLEDEDRMEDDQERRYEVAATSNKVLSVDTVE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2268 556 MobiDBLite consensus disorder prediction 488 507 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 166 180 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 477 556 - -
Prci14g2268 556 FunFam Trihelix transcription factor GT-2 362 423 - -
Prci14g2268 556 CDD GT1 72 137 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 220 250 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 1 32 - -
Prci14g2268 556 Coils Coil 277 308 - -
Prci14g2268 556 PANTHER FI21293P1 57 498 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 205 258 - -
Prci14g2268 556 SMART sant 70 132 IPR001005 -
Prci14g2268 556 SMART sant 358 420 IPR001005 -
Prci14g2268 556 Gene3D - 362 423 - -
Prci14g2268 556 Gene3D - 74 135 - -
Prci14g2268 556 ProSiteProfiles Myb-like domain profile. 72 130 IPR001005 -
Prci14g2268 556 MobiDBLite consensus disorder prediction 163 186 - -
Prci14g2268 556 Pfam Myb/SANT-like DNA-binding domain 72 158 IPR044822 -
Prci14g2268 556 Pfam Myb/SANT-like DNA-binding domain 361 447 IPR044822 -
Prci14g2268 556 Coils Coil 495 529 - -
Prci14g2268 556 ProSiteProfiles Myb-like domain profile. 362 418 IPR001005 -
Prci14g2268 556 CDD GT1 362 425 - -
Prci14g2268 556 MobiDBLite consensus disorder prediction 508 531 - -
Prci14g2268 556 FunFam Trihelix transcription factor GT-2 74 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2268 Prci-Chr14 29799785 29802571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2268 66 479 Trihelix Transcription Factor Family AT1G76890 49.896 1.46e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci14g2268 Myb_DNA-bind_4 8.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2268 - - pcin:129293735 925.235