Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2263 ATGAGCTTGGCCATGTCAGATCTCGCTGGAGACTCTGAACAACACTTGCTTCAAATCATTACTATCTTTGCCCAGGCCCTGTCGCTCAGCAAAATGCGCTTTCTGGGCTACCCCACAAATCTTGAGTTTGACTATGAAGCATTGGCACCGTTGCTTCATTTTCACATAAATAATGCTGGCGATCCATTTCTGGGAAGCTGCTACACTCTGAATTCAGCAGCGTTTGAAGTTTCTGTTCTTGACTGGTTCGCTAGCTTGTGGGACATTGCCAAGAACCAGTGCTGGGGATACGTCACCACCGGAGGAACTGAAGGCAATCTTCATGGGATTTTAGTAGGGAGGGAACAATTGCCAGATGGGATTCTATATGCCTCAGAAGAATCGCATTATTCAGTGTTCAAAATAGCAAGAATATGCAGAATGCAGTGCGTGAAGGTTGCAACACTGAGATCTGGTGAGATTGATTGTTCAGATCTCAAGGCTTCACTTCTTGCCCACAAGGACAAGCCTGCCATTATCAACATAAATATAGGAACAACTATGAATGGAGCTATTGATGATATTGATCTTGTGGTGCGAACACTTGAAGAATATGGATTTACTCGTGATCGGTTCTATATCCATTGTAATGGAGCTCTATTTGGACTAATGCTTCCTTTCATTAAACAAGCACCGAGGTTGAGTTTCAAGAAACCCATAGGAAGCATAGCAATTTCGGGGCACAAGTTTCTAGGATGTCCTGTGCCTTGTGGGGTTATAATAACTCGTTTGGAATACATCAAAGGCAACATGTCTAGTGATGTTGAGATCATAGCCTCAAGGGATGCCACAATCACAGGAAGCCGGAGCGGCCAGGCTGCGATCTTCCTCTGGTACGCTCTCAAGAAGAAAGGTTTGTTGGGCCTCAAGGAGGAAGTCGACAAGTGCATGAGAAATGCAGATTACTTGCTAGACAAGCTACAAAACGCAGGAATCAGTGCAATGAAGAATGAGTTTAGCAATATCGTGGTGTTTGAGAAGCCTCAAGATGAAGAATTTGCTCGCAGATGGAGTCTGGCTTGCAAAGGAAGCATGGCACATGTTGTGGCGATGCAGCACGTGACGCTTGAAATGTTGGACTCCTTTGTGAGTGAGTTTGTCCAAAAGCGATCCTTTAAGCTCTAA 1164 0.4476 MSLAMSDLAGDSEQHLLQIITIFAQALSLSKMRFLGYPTNLEFDYEALAPLLHFHINNAGDPFLGSCYTLNSAAFEVSVLDWFASLWDIAKNQCWGYVTTGGTEGNLHGILVGREQLPDGILYASEESHYSVFKIARICRMQCVKVATLRSGEIDCSDLKASLLAHKDKPAIININIGTTMNGAIDDIDLVVRTLEEYGFTRDRFYIHCNGALFGLMLPFIKQAPRLSFKKPIGSIAISGHKFLGCPVPCGVIITRLEYIKGNMSSDVEIIASRDATITGSRSGQAAIFLWYALKKKGLLGLKEEVDKCMRNADYLLDKLQNAGISAMKNEFSNIVVFEKPQDEEFARRWSLACKGSMAHVVAMQHVTLEMLDSFVSEFVQKRSFKL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2263 387 Gene3D - 52 294 IPR015421 GO:0003824
Prci14g2263 387 Pfam Pyridoxal-dependent decarboxylase conserved domain 73 328 IPR002129 GO:0016830|GO:0019752|GO:0030170
Prci14g2263 387 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 235 256 IPR021115 GO:0016831
Prci14g2263 387 Gene3D Aspartate Aminotransferase, domain 1 295 383 IPR015422 GO:0003824
Prci14g2263 387 SUPERFAMILY PLP-dependent transferases 33 381 IPR015424 -
Prci14g2263 387 PANTHER - 9 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2263 Prci-Chr14 29734314 29736247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2263 177 336 Calmodulin-binding Proteins AT5G17330 26.786 9.88e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2263 K25193 - gmx:100781665 563.148