Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2259 ATGAGAGCTGCGTCAGCTTCAACAACCACAGAGGGGGGGAGAGAGACATCAATGGATTTCTTCATTGAAGGTGTGGGGGAGAGCTCCTCTCCACCGCGCACCTTGAGCGGTTTCGGCAATTATGACGTGAGGAAAGATGTGTATAGTCGTTTAGTTGAAAACGGCCATGGCCAAGAGGCGGAATTTCGGGAGCAGTTAGACGCTCACTTCAACCGATTTCCTCCAAGTTATTTGCTTGATGTTAACATGGACAGAGCTGAAGATGTTTTATTACATCAGAAACTTCTTGCTTTGGCAAGGGACCCAAGCAAGCGTCCTGTCTACAATATACGCTTTTTGGAGCACATCTCTACTAGAATGGATGGTCAAGATCAGCAAATTGTTAGCGCTCATTCTAGCACAAGGCCATCTTGTCCTGCATCTAATGGGGAAGCTGTATCATCTCATAAAAGGGCAAGAGACTGTGCAGCTGAGTTTGAGCCTTGCTCTAAGCTTGAAGATCTAAATTTGGATGTTCGAAAGAACTCCAAGGAGGCTACAGACAACTACTACCAGAGGCATGAGGAAGTGAGTGTTCCAGTTCATGAAGTTATATTTTCTGCCATTGACAAGCCGAAGCTTTTAAGCCAGTTGTCTGCATTGCTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTTTTTTCAACAACTGATGGTTACTCCCTTGATGTATTTGTTGTGGATGGATGGCCAGTAGAGGACACACATGGGTTGTGTGAGGCCATGGAGAAAGCTGTCGCAAGAAGTGAGGGGTCTTGGTCTCGTTCTTTAAATTGTCATACGACTGTGGAGAGGGCCGTGATAGCAGGAGCAAAATCTGGTGATTGGGAAATTGACAGGAGATTGCTTAAGATAGGAGATAGAATAGCATCTGGATCTTGTGGAGATTTGTATCATGGAGTTTATCTTGGTCAAGATGTTGCTGTTAAGATTTTGAGATTTGAGCATTTGAATGATGCTTTGGAGGATGAGTTTGCCCAAGAAGTGGCAATTCTTAGGCAGGTGCATCATAAAAATGTTGTTCGTTTTATTGGTGCATGTACAAAATCTCCACATTTGTGGATTGTTACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCATAAAAACCATAATATGTTGGAGCTCTCTCAACTACTGAAGTTTGCGTTTGATGTCTGCAAGGGTATGGAGTATTTGCACAGAAACAATATAATTCACAGGGATCTGAAGACGGCCAATCTCTTGATGGATACCCACAATGTTGTTAAAGTAGCAGATTTTGGAGTAGCTCGGTTCCTGAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCAGAGGTTATAAACCATCAACCCTATGATCAGAAAGCTGATGTATTCAGTTTTTCCATAGTACTGTGGGAACTAGTAACTGCAAAGGTGCCTTATGATGCCATGACTCCGCTACAAGCTGCGCTAGGTGTGAGACAGGGGTTACGCCCAGAACTTCCAAAGCAAGGGCACCCTAAACTAATAGATTTAATGCAAAGATGTTGGGAAGCAATTCCAGCCAACCGGCCATCCTTCGCTGAGATAATAGTTGAACTGGAAAATCTCCTTAAAGAAGTCGGGAATGATTCAGAAACTAACGGTGCTTGA 1686 0.4377 MRAASASTTTEGGRETSMDFFIEGVGESSSPPRTLSGFGNYDVRKDVYSRLVENGHGQEAEFREQLDAHFNRFPPSYLLDVNMDRAEDVLLHQKLLALARDPSKRPVYNIRFLEHISTRMDGQDQQIVSAHSSTRPSCPASNGEAVSSHKRARDCAAEFEPCSKLEDLNLDVRKNSKEATDNYYQRHEEVSVPVHEVIFSAIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEDTHGLCEAMEKAVARSEGSWSRSLNCHTTVERAVIAGAKSGDWEIDRRLLKIGDRIASGSCGDLYHGVYLGQDVAVKILRFEHLNDALEDEFAQEVAILRQVHHKNVVRFIGACTKSPHLWIVTEYMPGGSLYDYLHKNHNMLELSQLLKFAFDVCKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDAMTPLQAALGVRQGLRPELPKQGHPKLIDLMQRCWEAIPANRPSFAEIIVELENLLKEVGNDSETNGA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2259 561 SMART serkin_6 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2259 561 CDD STKc_MAP3K-like 303 545 - -
Prci14g2259 561 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 SUPERFAMILY ACT-like 195 262 IPR045865 -
Prci14g2259 561 SUPERFAMILY Protein kinase-like (PK-like) 288 548 IPR011009 -
Prci14g2259 561 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Prci14g2259 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Prci14g2259 561 Gene3D Transferase(Phosphotransferase) domain 1 375 559 - -
Prci14g2259 561 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2259 561 ProSiteProfiles ACT domain profile. 196 270 IPR002912 -
Prci14g2259 561 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 144 548 - -
Prci14g2259 561 Pfam Protein tyrosine and serine/threonine kinase 297 545 IPR001245 GO:0004672|GO:0006468
Prci14g2259 561 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2259 Prci-Chr14 29656488 29676806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2259 2 555 MAP Kinase Kinase Kinase AT4G35780 48.330 3.15e-179 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci14g2259 PK_Tyr_Ser-Thr 2.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2259 - - gmx:100797987 880.167