Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2220 ATGGAACAGAATAGCGTTTTGTTCTCCGCATTGAGTGTGGGGGTTGGGTTAGGTGTCGGGCTTGGGTTGAGTCAGCGTCAAACCGTGCAGAAATGGGTTGGGTGGAATCGTGAGTCTCGAGAGCTTACTGGGGAGATGATTGAGAAGGAGCTCAAGAGGCTGGTGGTTGATGGAAAGTGCAGCAATGTCACATTCGATGATTTTCCTTATTACTTGAGTGAAAGAACTCGAGTGTTGCTGACAAGTGCTGCATACGTTCATTTAAAACAATATCACTTCTCAAAGCACACCCGAAACCTTTCACCAGCAAGTCAAGCTATATTACTTTCTGGACCTGCAGAATTGTACCAACAGATGCTTGCCAAAGCTCTAGCACATTACTTTGAGTCAAAGTTGCTTTTGCTAGATGTCGCTGACTTCTCTAGGATGATGCAGAGCAGATATGGATGTGCAAAAAAGGAACCAGCTTTTAAAAGGTCCATATCCGAGTTGACTCTGGAAAGAATGTCCAGTTTGTTTGGTTCCTTGCCAGTCCCTTCACCCAATGACACTAGAGGAACTTCACGTAGACAAATAAAAGGTAACGAAGCTTCCGATAATCCTCCAAGACTACGTAGGAATGCCTCTGCTGCAGCTGATATGAATAGCATTTATTCCTATTCTGGATCAACAACTTCAGGTCCCCAAAAGCGGCCAAGCAGTATATGCTTTGATGAAAAACTGTTTATGCATTCACTCTATAAGGTCTTGGTTTCTGTCTCAGAAACCAGTCCTATCATCCTATATATCAGGAATGCTGAGAATCTTTTTCTCAACTCACACGCATTATACAGTTTGTTCCAAAGAATGCTAAAGAAAATTTCAGGGTCAGTGTTGATACTTGGTTCCAAGATATTAGATTCAGAAGATGATTGCAGAGAAGTTGATGAGAAGCTTACTGTGTTATTTCCTTACACCATTGAGATCAAACCGCCTGAAGATGAGGCCAACCTTGTCAGCTGGAAAGCCAAGCTGGAAGAGGACATGAAAATACTTCAGTTTCAAGATAGCAGAAACCACATTGCTGAAGTACTTGCTGAAAATGACATCGAATGTGATGACTTGAACAATATCTGTCATGCAGACACCATGCTCCTCAGTCAGTATACTGAAGAGATGGTGGTATCTGCAATATCTCACCATTTGATGAATAACAAGCATCCAGAATACCGAAATGGGAAATTAATCATATCAGCCAAGAGTTTGTCCCATGGATTAAGTCTATTCCAGGAAGGGAAAACTAGTGGAACTGGTAATCTGAAGTTGGAGAATAATGCCCCTAAGAAGGACACTGCTGGAGAAGGAATTGCTGGTGCAAGGAATGATGTACGTGATATCTTTGCACCTGAAAAGAAAAGTGCAATGGAAAAATGTATCCCTGTGACAAAAAAAGATGGCGACAGCACTACTGCTCCTGCTTCAGTGAAAGCTGAAGTTCCTGACAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTTATCCCCGCAAATGAGATAGGGGTTACATTTGCAGACATTGGTGCACTAGATGAAATTAAGGAATCACTTCAAGAGATGGTCATGCTCCCCCTTCGTAGACCAGACCTCTTCAAAGGTGGTCTTCTTAAGCCATGTAGAGGCATATTGCTTTTCGGGCCTCCTGGTACTGGGAAAACTATGATGGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTCATCAATGTCTCAATGTCCACGATTACTTCCAAGTGGTTTGGGGAAGATGAGAAGAATGTCCGAGCTTTGTTCACACTTGCAGCAAAGGTTGCCCCTACGATAATCTTTGTTGATGAAGTTGATAGTATGCTTGGACAGAGAACAAGAAATGGAGAACATGAGGCCATGAGGAAGATTAAAAATGAGTTTATGACCCATTGGGATGGCCTATTGACAAAACCAGGCGAGCAGATTCTAGTACTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATAAGACGGTTTGAGCGCAGAATCATGGTAGGTCTTCCAACTGCGGAGAGCAGGGAACAGATCTTGAAAACCCTCCTATCTAAAGAACAACATGAAAACATGGACTTCAAAGAGCTTGCAATCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTATGCATGACAGCTGCATATCGACCTGTTAGGGAGCTCATGCAGAAGGAAATTTTGAAGGAAAAGGAAAAGAAGAAAAGAGAGGCAGAAGCCAAAAGCTCAGAAGATGCTACAGACATTAGAGAAGGTGGAAAAGATGAAGTGATTACCCTGAGGCCTCTAAACATGGAAGACATGAAATATGCCAAGTCTCAGATTGCTGCAAGTTTTGCTGTTGAAGGATCAATAATGGGTGAGCTGAAGCAGTGGAACGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAGCAGCTTTCGTACTTCCTCTAG 2484 0.4275 MEQNSVLFSALSVGVGLGVGLGLSQRQTVQKWVGWNRESRELTGEMIEKELKRLVVDGKCSNVTFDDFPYYLSERTRVLLTSAAYVHLKQYHFSKHTRNLSPASQAILLSGPAELYQQMLAKALAHYFESKLLLLDVADFSRMMQSRYGCAKKEPAFKRSISELTLERMSSLFGSLPVPSPNDTRGTSRRQIKGNEASDNPPRLRRNASAAADMNSIYSYSGSTTSGPQKRPSSICFDEKLFMHSLYKVLVSVSETSPIILYIRNAENLFLNSHALYSLFQRMLKKISGSVLILGSKILDSEDDCREVDEKLTVLFPYTIEIKPPEDEANLVSWKAKLEEDMKILQFQDSRNHIAEVLAENDIECDDLNNICHADTMLLSQYTEEMVVSAISHHLMNNKHPEYRNGKLIISAKSLSHGLSLFQEGKTSGTGNLKLENNAPKKDTAGEGIAGARNDVRDIFAPEKKSAMEKCIPVTKKDGDSTTAPASVKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQEMVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRNGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPTAESREQILKTLLSKEQHENMDFKELAIMTEGYSGSDLKNLCMTAAYRPVRELMQKEILKEKEKKKREAEAKSSEDATDIREGGKDEVITLRPLNMEDMKYAKSQIAASFAVEGSIMGELKQWNDLYGEGGSRKKQQLSYFL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2220 827 ProSitePatterns AAA-protein family signature. 656 675 IPR003960 GO:0005524|GO:0016887
Prci14g2220 827 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 512 687 - -
Prci14g2220 827 Pfam ATPase family associated with various cellular activities (AAA) 553 683 IPR003959 GO:0005524|GO:0016887
Prci14g2220 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 745 IPR027417 -
Prci14g2220 827 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 826 - -
Prci14g2220 827 Coils Coil 740 760 - -
Prci14g2220 827 MobiDBLite consensus disorder prediction 173 195 - -
Prci14g2220 827 MobiDBLite consensus disorder prediction 426 448 - -
Prci14g2220 827 Gene3D - 512 684 IPR027417 -
Prci14g2220 827 SMART AAA_5 549 686 IPR003593 GO:0016887
Prci14g2220 827 Gene3D - 685 756 - -
Prci14g2220 827 MobiDBLite consensus disorder prediction 173 205 - -
Prci14g2220 827 Pfam AAA+ lid domain 707 743 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2220 Prci-Chr14 29190649 29198512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2220 513 742 Calmodulin-binding Proteins AT3G56690 40.171 3.14e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2220 - - gmx:100804099 1182.55