Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2194 ATGGTCTCCAAAAACCCAAACCCCTCAGAGGGCTTCTACTTGGATCCCCCTGGCATGGCGCTTCCTGGCCTTGGCCCCTTCGCCTCCGTCACCGCCGCTGCGACTACCACCACCGCCTCCAACGCTAATTCATCGGACGACCCTTCGAAGAAGATCCGTAAGCCGTACACTATAACCAAGTCCAGGGAGAGCTGGAGCGAGCCCGAGCACGACAAATTCCTCGAAGCCCTCCAACTTTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGCAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGAGCAAATGAACATCTACCTCCGCCCAGGCCAAAAAGAAAGGCTGCCCATCCATATCCTCAGAAAGCTTCCAAAAATGCTCTGATACACTCTCAAATATCAGGATCCTTTCAATCTTCATCTCCTATGGTTGAACCTGCATATATGATAAAGCCTGATCCCTCAGCAATGATCAAAACTCCAGTCACTAATGCTGCAGTGTCTTCATGGTCAAACAACACTTTGCAGACAACCAATTTACTGCATGGTCCCAGAATGAATAATAGTTGCAGTAGCAGTGAAAGCACTCAGAGAGCACGGCCAATTGGTGTATCTACTGGTCAAGGGAATAACAGTCATTCATTGAGAGTTCTGCCAGACTTTGCTCAAGTATACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCTGCTGGGCATCTGCAGAAACTAAAAAAGATGGACCCTATAGATGTCGAGACGGTACTACTATTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATAGAAGGTTGCTCTCTTCTTATGAGGCGGAACCAGAGACAATGTAG 903 0.464 MVSKNPNPSEGFYLDPPGMALPGLGPFASVTAAATTTTASNANSSDDPSKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNALIHSQISGSFQSSSPMVEPAYMIKPDPSAMIKTPVTNAAVSSWSNNTLQTTNLLHGPRMNNSCSSSESTQRARPIGVSTGQGNNSHSLRVLPDFAQVYKFIGSVFDPKAAGHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHRRLLSSYEAEPETM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2194 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Prci14g2194 300 Gene3D - 65 112 - -
Prci14g2194 300 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Prci14g2194 300 CDD SANT 64 107 IPR001005 -
Prci14g2194 300 MobiDBLite consensus disorder prediction 190 214 - -
Prci14g2194 300 MobiDBLite consensus disorder prediction 112 137 - -
Prci14g2194 300 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Prci14g2194 300 SMART sant 61 109 IPR001005 -
Prci14g2194 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Prci14g2194 300 PANTHER SWI/SNF COMPLEX-RELATED 32 279 - -
Prci14g2194 300 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Prci14g2194 300 FunFam protein REVEILLE 6 isoform X1 64 112 - -
Prci14g2194 300 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2194 Prci-Chr14 29059341 29065234 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g2194 Myb_DNA-binding 9.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2194 - - zju:107414737 447.588