Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2193 ATGGTCTCCAAAAACCCAAACCCCTCAGAGGGCTTCTACTTGGATCCCCCTGGCATGGCGCTTCCTGGCCTTGGCCCCTTCGCCTCCGTCACCGCCGCTGCGACTACCACCACCGCCTCCAACGCTAATTCATCGGACGACCCTTCGAAGAAGATCCGTAAGCCGTACACTATAACCAAGTCCAGGGAGAGCTGGAGCGAGCCCGAGCACGACAAATTCCTCGAAGCCCTCCAACTTTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGCAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGAGCAAATGAACATCTACCTCCGCCCAGGCCAAAAAGAAAGGCTGCCCATCCATATCCTCAGAAAGCTTCCAAAAATGGATCCTTTCAATCTTCATCTCCTATGGTTGAACCTGCATATATGATAAAGCCTGATCCCTCAGCAATGATCAAAACTCCAGTCACTAATGCTGCAGTGTCTTCATGGTCAAACAACACTTTGCAGACAACCAATTTACTGCATGGTCCCAGAATGAATAATAGTTGCAGTAGCAGTGAAAGCACTCAGAGAGCACGGCCAATTGGTGTATCTACTGGTCAAGGGAATAACAGTCATTCATTGAGAGTTCTGCCAGACTTTGCTCAAGTATACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCTGCTGGGCATCTGCAGAAACTAAAAAAGATGGACCCTATAGATGTCGAGACGGTACTACTATTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATAGAAGGTTGCTCTCTTCTTATGAGGCGGAACCAGAGACAATGTAG 879 0.4664 MVSKNPNPSEGFYLDPPGMALPGLGPFASVTAAATTTTASNANSSDDPSKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNGSFQSSSPMVEPAYMIKPDPSAMIKTPVTNAAVSSWSNNTLQTTNLLHGPRMNNSCSSSESTQRARPIGVSTGQGNNSHSLRVLPDFAQVYKFIGSVFDPKAAGHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHRRLLSSYEAEPETM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2193 292 Gene3D - 65 112 - -
Prci14g2193 292 FunFam protein REVEILLE 6 isoform X1 64 112 - -
Prci14g2193 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Prci14g2193 292 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Prci14g2193 292 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Prci14g2193 292 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Prci14g2193 292 MobiDBLite consensus disorder prediction 112 150 - -
Prci14g2193 292 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Prci14g2193 292 PANTHER SWI/SNF COMPLEX-RELATED 32 271 - -
Prci14g2193 292 CDD SANT 64 107 IPR001005 -
Prci14g2193 292 MobiDBLite consensus disorder prediction 36 55 - -
Prci14g2193 292 SMART sant 61 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2193 Prci-Chr14 29059340 29065234 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g2193 Myb_DNA-binding 9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2193 - - zju:107414737 438.343