Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2182 ATGTTTTCTCCTTATGGGAAGATTATATCTGAGGATTTCTTGTGGCACACTCGTGGCCCTAAGCGTGGAGAGCCACGCGGCTTTGCTTTTATTCAGTATAGCTCAAAAGAGGAAGCAGAAATGGCCAAGGAGAAAATGCACGGCAAATTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTTGCTAGTGAGAAGAGCCAGTTAGAAACGGCCAATAACTCTTCAAAAGCCATGGGAGAAGGGCACAAGATACACTTTACAGGTAATGGCGTAGGACAGACAAGTCGTAGTGCAAAAATAGCTGCAATAAAGAACAAGTTGAAATCAATAGAGGAGGAGAGCTCTAGGCCCAAGAAACAGAAGCAAACTGATGATGTGTCTTGA 381 0.4541 MFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSSKEEAEMAKEKMHGKLACGRPLVVRLASEKSQLETANNSSKAMGEGHKIHFTGNGVGQTSRSAKIAAIKNKLKSIEEESSRPKKQKQTDDVS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2182 126 Gene3D - 1 77 IPR012677 -
Prci14g2182 126 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 20 121 - -
Prci14g2182 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 63 IPR000504 GO:0003723
Prci14g2182 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 56 IPR000504 GO:0003723
Prci14g2182 126 MobiDBLite consensus disorder prediction 65 94 - -
Prci14g2182 126 SUPERFAMILY RNA-binding domain, RBD 1 71 IPR035979 GO:0003676
Prci14g2182 126 MobiDBLite consensus disorder prediction 106 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2182 Prci-Chr14 28976371 28978859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2182 1 64 Eukaryotic Initiation Factors Gene Family AT3G16380 37.500 4.88e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2182 K24527 - gmx:100804800 205.682