LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g2157	ATGCCTTCCTGGTGGGGGAAATCATCGTCAAAAGAAACCAAGAAAAAAGGGAGTAAGGAAAGTTTCATTGATACATTACAAAGGAAACTTAAAATCCCATCTGAAGGTAAGGTAAGCAGTAGGTCTGGAGGACCTAGGAGAAACTGCAATGACACAATTTCAGAAAAGGGAGCTCAGTCTCCAGCTGAATCAAGGTCTCCTTCACCATCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGCAGGCATCCTTCATGTATAGGACGAACAGATTCTGAAATTTGTATATCATCAAAGTCAAGAGGGGAGAAGGGTTCCAAGACATCAATGTATCGGCCACTCCCAAGACCTGCATGCATTCGTAATAGGCCAAACCCTACAGATTTAGATGGAGACCCTATCACTGCATCAGTATGTAGTGAAAGCTCTGCTGATAGTGATGAGCCAGCTGACTCATGTCAACGCAGTCCGCTGGCAACTGACTCAGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGCTCAATGCTCAAGGATCAATCATCTACTGTTTTACAAGTAAATTCAAGAGAGGTCAAAAAGCCAGCAAACATTCTGAGCAATCACGTATCTCCTACTTCCCCCAAACGGAGACCTTTAAGCAATCACGTGCCAAATCTACAGGTTCCTCCTCATGCTATTCTCTTTAGTGCTCCTGACAGCTCCAAGTCAAGTCCATCAAGAAGTCCATTGAGAGCACCTGGCACAGAACAAGTGCTGAGCTCTGCTTTTTGGGCTGGAAAGCAATATTCAGAGGTCAATTTGATTGGATCTGGGCAGTGCTCCAGTCCAGGTTCTGGTCAGAACTCTGGGCATAATTCGATGGGAGGAGACATGACAGGACAGATATTTTGGCAACCAAGTAGGGGTAGCCCTGAGTATTCTCCTGTTGTTAGCCCCAGAATGACTAGTCCAGGTCCAAGCTCTAGGATTCAAAGTGGAGCTGTCACACCCATTCATCCTAGGGCTGGGGCAACACCCACTGAATCCCAGACTGGATGGGTTGATGATGGTAAACAACAGAGTCATCGTCTGCCCCTTCCACCCCTAACAGTTACCAATTCCTTGCCTTTCTCTCACTCAAATTCGGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCTTTAAGCCCTGGCTCTCGATGGAAAAAGGGAAAGCTGCTGGGAAGAGGTACATTTGGACATGTCTATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGCGCAATGAAGGAGGTAACACTGTTCTCAGATGATGCCAAGTCCAAGGAAAGTGCAAAGCAATTAATGCAGGAAATTGCTCTATTAAGTCGTTTACGGCATCCCAATATTGTGCAGTATTATGGTTCTGAAACAGTAGATGACAAGCTTTACATATACCTGGAGTATGTGTCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGAAATTTGGTGAACTAGCTATCCGCAACTATACCCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAATGGCCGAGTAATCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGTCCTTACTGGATGGCTCCCGAGGTCATAAAGAACTCTAGTGGTCGCAACCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGAGCCAATATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCACCTCTCAAATGAAGGAAAGGATTTTGTTCGGAAATGTCTACAACGTAACCCACAGGATCGTCCTTCAGCCCAAGAACTGTTAGACCACCCTTTTGTAAAATGTGCTGCGCCTTTGGAAAGACCTATTCTTGGTGCTGAATCATCAGATCAGGTCTCTGTTATTGCGCTTGGAGCAAAATCTCTGGGTGCTGGACAAGGAAGAAACCTCTCTGCCCTGGATAACGACAGGCTTTCTGTTCATTCGTCAAGGGTGTTGAAAATTAACCCGCATGCGAGTAATGAAATCCATATTCCAAGGAATATTTCTTGCCCTGTCTCTCCCATCGGAAGCCCACTTTTGCGGTCAAGATCACCACAGCACATGAATGGGAGAATGTCTCCCTCTCCTATATCTAGCCCCCGTACAGTTTCTGGCGCATCCACACCTCTCACTGGTGGTAGTGGTGCTATTCCATTTGGCAATCACCTGAAACAGTCAGCTTACTATCAAGAGGGTCTTGCAAGCTTGCCAAAGCACTCAAATGGTATCTACATTAGTAACCCTGCTCATCATGACTCGAGTGTTGACATTTTTTGCACCCAGCAAATGGGGTCTCAAACAGAATTGATTCTGAGTGACAATGATGTTCTGGGGAAGCATTTTGCGAGGCCTTCTGTTGAGCCTTATGATGTTCAGTCAGTCTTGGCTGATCGTGTTTCCCGACAGCTACTGGGAGATCATGTTAAAATTAACCCGTCCCTGGATCTTAGTCCCAATTCTTCTTTGCTCAACCGGTCAAATGCTCTATGA	2697	0.4549	MPSWWGKSSSKETKKKGSKESFIDTLQRKLKIPSEGKVSSRSGGPRRNCNDTISEKGAQSPAESRSPSPSKVARCQSFAERPHAQPLPLPGRHPSCIGRTDSEICISSKSRGEKGSKTSMYRPLPRPACIRNRPNPTDLDGDPITASVCSESSADSDEPADSCQRSPLATDSETGTRTAAGSPSSSMLKDQSSTVLQVNSREVKKPANILSNHVSPTSPKRRPLSNHVPNLQVPPHAILFSAPDSSKSSPSRSPLRAPGTEQVLSSAFWAGKQYSEVNLIGSGQCSSPGSGQNSGHNSMGGDMTGQIFWQPSRGSPEYSPVVSPRMTSPGPSSRIQSGAVTPIHPRAGATPTESQTGWVDDGKQQSHRLPLPPLTVTNSLPFSHSNSAATSPSMPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGKFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGRNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPQDRPSAQELLDHPFVKCAAPLERPILGAESSDQVSVIALGAKSLGAGQGRNLSALDNDRLSVHSSRVLKINPHASNEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTVSGASTPLTGGSGAIPFGNHLKQSAYYQEGLASLPKHSNGIYISNPAHHDSSVDIFCTQQMGSQTELILSDNDVLGKHFARPSVEPYDVQSVLADRVSRQLLGDHVKINPSLDLSPNSSLLNRSNAL	898

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g2157	898	ProSiteProfiles	Protein kinase domain profile.	411	668	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g2157	898	SUPERFAMILY	Protein kinase-like (PK-like)	409	773	IPR011009	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	146	225	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	1	259	-	-
	Prci14g2157	898	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	58	681	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	9	35	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	348	362	-	-
	Prci14g2157	898	FunFam	Mitogen-activated protein kinase kinase kinase	409	692	-	-
	Prci14g2157	898	ProSitePatterns	Protein kinases ATP-binding region signature.	417	440	IPR017441	GO:0005524
	Prci14g2157	898	SMART	serkin_6	411	668	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	242	259	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	370	397	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	41	73	-	-
	Prci14g2157	898	Gene3D	Transferase(Phosphotransferase) domain 1	409	687	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	285	339	-	-
	Prci14g2157	898	Pfam	Protein kinase domain	412	668	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g2157	898	CDD	STKc_MEKK1_plant	410	668	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	285	412	-	-
	Prci14g2157	898	MobiDBLite	consensus disorder prediction	754	779	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g2157	Prci-Chr14	28770439	28778270	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g2157	1	896	MAP Kinase Kinase Kinase	AT1G63700	58.811	0.0	883

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Prci14g2157		Pkinase	3.9e-73	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g2157	K20717		-	gmx:100792783	1404.81