Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2147 ATGCCAGTTGAAAAACACAAGGTTTTTGGTACTTCAGATGTCATGAAAGCAGAGGATGGAAATGACTCCTTAGATACCATAATCAGAAAGGCAATTGGCAGAGAACCTTTTCTTTCTGTTCCAAGGGCTAGTGACAGTCCAGTCCAGTGGATACAATTACTTCATGCGTTAGATCAGCAAGAACCGCCAGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTTGTCTACAATTAATTATAGAAGACATATACGTGTTTACCATCGGTTGAAAAAGATTGATAAGGATTCTACAAAAAATAGAGATCTGTTAGGAGCATATTGGGATAAGCTATCAGTAGAAGAGGCAAAAGAAGTTGTATCATTCAAGAATGTAATGCTGGAGGAAGTTCCAGGGTCTTCTATGTTAAAAGCGCTGACGACTCTTGTTCGGAAACAAGGATTTTCTTCACTTCCACAGAATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCAAGATCTTCCATTCTTTCTATATCTTCCAAGGAGTTGTTCAGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCTATGCAAAAATATATTTTTGATGGAGAGCCAGGAAAGATTGGCCTTGAACCAAAAAACCTAGTTGCTTGTACTAGTTTCTTGCTAGAACAGAAATTGGTAACAGCATGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGCCAGAAACTGCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATCTTGGAGAGGAAACGCCAGAAAAAGCTTAGGCAAAAGGAACAAAAGGCTAGGGGGCAAAAGCTTGAGGATGAGGCAGAAAGGAAAAAGACTGGTAGCAGTTCAGCAGCGGACAGTTCATTAGCAGAAGCATTTTTGGATACATGTGACTCTGGAGAACTTAATCCAGATACATTTACAGGCCATGGTCCTTCACTACCTGTGCTCTTCCATTGCACAGACGCTAATGAAGTCATGGATGGGGGTTCTCTGTCATTGTATGGTTGTGGCACTGATCAGAACATTGAACAAGAGACATCCCAAGGACATGCTTGTCAACACCTTGTGGTTGCTCAACCAAAACCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAAATTTCCAAGCCTGGAGTCATCCAAAAGTATGGGACCCACCGCGAACAAAAGGCTAATTCCATGCTTAATGGTAACAAAGTATGGAGCCGAAAGCCCAAGCAAAGTATTATTGGGGTACATTCAAAAGCCAGACTAGAGAAAGAACCAGATGAGGGTAAAAACCGTGAAGTTTTAATTGGATCAATATCTGTTACTCTTGGAAATAGCAGCCAATCAGAGGATAATCTGGTAGCGTCTGGAGAGGACCGCATGGGAGGGAATTTAACGAACAATAGGAATGCTCAGGAGAAGCCAGTCAAACCTGATTCTGGACAGATCAGTAACAATCGATTAACAGTTAAGGCTGTTAAACTTTGGAGGCCAGTTACTCATCATGGAACTAAATATTCATCACCACTTCACAGTGCTGGTCCAGAAGCTCATGCAATAGATGATCAAAATTTGGCCGATCAAAATTCTCTGAGGCCATGTGACTTGGATAATAGTGATAGTTTTGAGAATAATTCCTTCCATCTAGAGGGTCAAGTTGGTCCAGGAAACTTGCGGTATTCCAGTCAAGCTGCCAAAGCCTTTCTTGCAGAAAGATGGAAAAAAGCTATTTTGTCAAACCATGTGAAATTGGTTCTTTCACCGGACTCTGAACCTCCTAGGTGCATGGAGGTACAAGATTGTGAACTAGCTGCATGCCAATCTTCAAATATTGACAAATGCTGCATTCTTGCAAGTGCAGAGATTCGGCTGCCCGCAACCTCATTTAAATCCAAAATCAGAATGAAGCCCGGAAACGGTGTTAAGATAAAGTACATTCCCAAACAAAGAACAGCTACTTGA 2043 0.4195 MPVEKHKVFGTSDVMKAEDGNDSLDTIIRKAIGREPFLSVPRASDSPVQWIQLLHALDQQEPPGWPLLSPLKVQLQKCEKCSREFLSTINYRRHIRVYHRLKKIDKDSTKNRDLLGAYWDKLSVEEAKEVVSFKNVMLEEVPGSSMLKALTTLVRKQGFSSLPQNYLKAGSALLDIVQARSSILSISSKELFSILDSASEKTFLCGAAVSMQKYIFDGEPGKIGLEPKNLVACTSFLLEQKLVTAWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKARGQKLEDEAERKKTGSSSAADSSLAEAFLDTCDSGELNPDTFTGHGPSLPVLFHCTDANEVMDGGSLSLYGCGTDQNIEQETSQGHACQHLVVAQPKPQWAVANGFHANHNSQISKPGVIQKYGTHREQKANSMLNGNKVWSRKPKQSIIGVHSKARLEKEPDEGKNREVLIGSISVTLGNSSQSEDNLVASGEDRMGGNLTNNRNAQEKPVKPDSGQISNNRLTVKAVKLWRPVTHHGTKYSSPLHSAGPEAHAIDDQNLADQNSLRPCDLDNSDSFENNSFHLEGQVGPGNLRYSSQAAKAFLAERWKKAILSNHVKLVLSPDSEPPRCMEVQDCELAACQSSNIDKCCILASAEIRLPATSFKSKIRMKPGNGVKIKYIPKQRTAT 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2147 680 Coils Coil 266 286 - -
Prci14g2147 680 MobiDBLite consensus disorder prediction 290 306 - -
Prci14g2147 680 MobiDBLite consensus disorder prediction 279 313 - -
Prci14g2147 680 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 679 - -
Prci14g2147 680 MobiDBLite consensus disorder prediction 472 510 - -
Prci14g2147 680 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Prci14g2147 680 MobiDBLite consensus disorder prediction 488 510 - -
Prci14g2147 680 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2147 Prci-Chr14 28750987 28758371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2147 18 677 C2H2 Transcription Factor Family AT4G25610 41.379 6.42e-145 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci14g2147 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2147 - - gmx:100799153 794.653